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IllnessSpinocerebellar ataxia, autosomal dominant; differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Spinocerebellar ataxia, autosomal dominant, comprising 14 guideline curated genes [6 core genes, 4 core candidate genes] and altogether 42 curated genes according to the clinical signs

ID
AP1050
Number of genes
35 Accredited laboratory test
Examined sequence length
24,2 kb (Core-/Core-canditate-Genes)
108,6 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

X

[NGS + after analyses of most frequent repeat expansions]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
AFG3L22394NM_006796.3AD
ATXN12448NM_000332.3AD
ATXN23462NM_002973.4AD
ATXN31086NM_004993.6AD
ATXN72679NM_000333.4AD
CACNA1A6786NM_001127221.2AD
FGF14744NM_004115.4AD
KCNC32274NM_004977.3AD
PPP2R2B1350NM_181678.2AD
TBP960NM_003194.5AD
ATN13573NM_001007026.2AD
ATP1A33042NM_152296.5AD
ATXN80AD
CACNA1G6945NM_018896.5AD
CCDC88C6087NM_001080414.4AD
DNMT14899NM_001130823.3AD
EEF22577NM_001961.4AD
ELOVL4945NM_022726.4AD
ELOVL5900NM_021814.5AD
FAT213050NM_001447.3AD
GRM13585NM_001278064.2AD
ITPR18088NM_002222.7AD
KCND31968NM_004980.5AD
MME2253NM_007289.4AD
PDYN765NM_024411.5AD
PLD31473NM_001031696.4AD
PRKCG2094NM_002739.5AD
PUM13602NM_001020658.2AD
SPTBN27173NM_006946.4AD, AR
STUB1912NM_005861.4AD
TGM62121NM_198994.3AD
TMEM240522NM_001114748.2AD
TRPC32766NM_001130698.2AD
TTBK23735NM_173500.4AD
TUBB4A1335NM_006087.4AD

Informations about the disease

Clinical Comment

Autosomal-dominantly inherited cerebellar ataxias (ADCAs) or spinocerebellar ataxias (SCAs) are a heterogeneous group of neurodegenerative disorders characterized by dysfunction of the cerebellum and brainstem aas well as associated tracts and connections. All patients with SCAs present with cerebellar ataxia. Other symptoms are variable and sometimes disease-specific, including extrapyramidal features, long pathway symptoms, peripheral neuropathy, cognitive decline and seizures. The so-called polyglutamine ataxias (intragenically triggered by prolonged CAG repeats), including the comparatively very common SCA1, SCA2, and SCA3, are progressive disorders and result in shortened life expectancy. Several other autosomal dominant ataxias cause significant morbidity but are not associated with earlier death. SCA6 is the most common form resulting in virtually isolated cerebellar ataxia. In SCA7, the ataxia is associated with pigmentary retinopathy. The next most common forms involve SCA17 and SCA12. All of the above SCA forms are caused by expanded CAG repeat blocks, with virtually every SCA entity having its own boundaries between physiological polymorphism and pathogenic expansion. Additional and rarer SCA forms are triggered either by expansion of other simple repetitive elements or by point mutations in the various SCA genes. In total, more than 40 dominantly inherited SCAs are currently defined by molecular genetics, and the diagnostic yield amounts up to 60%. Nevertheless, a negative DNA result does not constitute exclusion of the clinical diagnosis.

References: https://www.ncbs.nlm.nih.gov/books/NBK1138/

 

Synonyms
  • Alias: Ataxia with cerebellar anomalies
  • Alias: Cerebellar ataxia, AD
  • Alias: SCA, AD
  • Allelic: Alternating hemiplegia of childhood 2 (ATP1A3)
  • Allelic: Brugada syndrome 9 (KCND3)
  • Allelic: Charcot-Marie-Tooth disease, axonal, type 2T (MME)
  • Allelic: Combined oxidative phosphorylation deficiency 13 (PNPT1)
  • Allelic: Congenital hypotonia, epilepsy, developmental delay + digital anomalies (ATN1
  • Allelic: Deafness, AR 70, with/-out adult-onset neurodegeneration (PNPT1)
  • Allelic: Dystonia-12 (ATP1A3)
  • Allelic: Epileptic encephalopathy, early infantile, 42 (CACNA1A)
  • Allelic: Episodic ataxia, type 2 (CACNA1A)
  • Allelic: Gillespie syndrome (ITPR1)
  • Allelic: Hydrocephalus, congenital, 1 (CCDC88C)
  • Allelic: Ichthyosis, spastic quadriplegia + mental retardation (ELOVL4)
  • Allelic: Leukodystrophy, hypomyelinating, 6 (TUBB4A)
  • Allelic: Migraine, familial hemiplegic, 1 (CACNA1A)
  • Allelic: Migraine, familial hemiplegic, 1, with progressive cerebellar ataxia (CACNA1A)
  • Allelic: Neuropathy, hereditary sensory, type IE (DNMT1)
  • Allelic: Optic atrophy 12 (AFG3L2)
  • Allelic: Spastic ataxia 5, AR (AFG3L2)
  • Allelic: Spinocerebellar ataxia, AR 13 (GRM1)
  • Allelic: Spinocerebellar ataxia, AR 14 (SPTBN2)
  • Allelic: Spinocerebellar ataxia, AR 16 (STUB1)
  • Allelic: Stargardt disease 3 (ELOVL4)
  • CAPOS syndrome (ATP1A3)
  • Cerebellar ataxia, deafness + narcolepsy, AD (DNMT1)
  • Dentatorubral-pallidoluysian atrophy (ATN1^_CAG)
  • Developmental + epileptic encephalopathy 47 (FGF12)
  • Dystonia 4, torsion, AD (TUBB4A)
  • Machado-Joseph disease (ATXN3_CAG)
  • Spinocerebellar ataxia 1 (ATXN1_CAG)
  • Spinocerebellar ataxia 10 (ATXN10_ATTCT)
  • Spinocerebellar ataxia 11 (TTBK2)
  • Spinocerebellar ataxia 12 (PPP2R2B)
  • Spinocerebellar ataxia 13 (KCNC3)
  • Spinocerebellar ataxia 14 (PRKCG)
  • Spinocerebellar ataxia 15 (ITPR1)
  • Spinocerebellar ataxia 17 (TBP_CAG)
  • Spinocerebellar ataxia 19 (KCND3)
  • Spinocerebellar ataxia 2 (ATXN2_CAG)
  • Spinocerebellar ataxia 21 (TMEM240)
  • Spinocerebellar ataxia 23 (PDYN)
  • Spinocerebellar ataxia 25 (PNPT1)
  • Spinocerebellar ataxia 26 (EEF2)
  • Spinocerebellar ataxia 27A (FGF14)
  • Spinocerebellar ataxia 27B, late-onset (FGF14)
  • Spinocerebellar ataxia 28 (AFG3L2)
  • Spinocerebellar ataxia 29, congenital nonprogressive (ITPR1)
  • Spinocerebellar ataxia 31 (BEAN1)
  • Spinocerebellar ataxia 34 (ELOVL4)
  • Spinocerebellar ataxia 35 (TGM6)
  • Spinocerebellar ataxia 36 (NOP56_GGCCTG)
  • Spinocerebellar ataxia 37 (DAB1_ATTTC)
  • Spinocerebellar ataxia 38 (ELOVL5)
  • Spinocerebellar ataxia 40 (CCDC88C)
  • Spinocerebellar ataxia 41 (TRPC3)
  • Spinocerebellar ataxia 42 (CACNA1G)
  • Spinocerebellar ataxia 42, early-onset, severe, with neurodevelopmental deficits (CACNA1G)
  • Spinocerebellar ataxia 43 (MME)
  • Spinocerebellar ataxia 44 (GRM1)
  • Spinocerebellar ataxia 45 (FAT2)
  • Spinocerebellar ataxia 46 (PLD3)
  • Spinocerebellar ataxia 47 (PUM1)
  • Spinocerebellar ataxia 48 (STUB1)
  • Spinocerebellar ataxia 5 (SPTBN2)
  • Spinocerebellar ataxia 50 (NPTX1)
  • Spinocerebellar ataxia 6 (CACNA1A)
  • Spinocerebellar ataxia 7 (ATXN7_CAG)
  • Spinocerebellar ataxia 8 (ATXN8OS_CTG)
  • Spinocerebellar ataxia 8 (ATXN8_CAG)
  • Spinocerebellar ataxia, AR 20 [both, AD + AR; biallelic more severe disease; panelapp] 20 (SNX14)
Heredity, heredity patterns etc.
  • AD
  • AR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined