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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessPrenatally abnormal heart, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for prenatally abnormal hearts containing 16 core/core candidate genes and altogether 78 curated genes according to the clinical signs

ID
PP0004
Number of genes
54 Accredited laboratory test
Examined sequence length
41,8 kb (Core-/Core-canditate-Genes)
156,5 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • Amniotic fluid (after amnocentesis)
  • Chorionic villus
  • Umbilical cord blood
Diagnostic indications

NGS +

[[Sanger]]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
ACTC11134NM_005159.5AD
ANKRD117992NM_013275.6AD
CDK134711NM_003718.5AD
CHD78994NM_017780.4AD
ELN2175NM_000501.4AD
GATA41329NM_002052.5AD
GATA61788NM_005257.6AD
NKX2-5975NM_004387.4AD
PIGL759NM_004278.4AR
PTPN111782NM_002834.5AD
TAB22082NM_015093.6AD
TBX11488NM_080647.1AD
TBX201344NM_001077653.2AD
TBX51557NM_000192.3AD
WDPCP2241NM_015910.7AR
ZIC31404NM_003413.4XLR
ABL13450NM_007313.2AD
ACVR2B1539NM_001106.4AD
B3GAT31008NM_012200.4AR
BMP21191NM_001200.4AD
BRAF2301NM_004333.6AD
CFAP531545NM_145020.5AR
CHD45739NM_001273.5AD
CITED2813NM_001168388.3AD
CRELD11269NM_001031717.4AD
DSP8616NM_004415.4AD, AR
FLNA7920NM_001456.4XL
GATA51194NM_080473.5AD, AR
GDF11119NM_001492.6AD, AR
GJA11149NM_000165.5AD, AR
JAG13657NM_000214.3AD
KMT2D16614NM_003482.4AD
KRAS567NM_004985.5AD
KYNU924NM_001032998.2AR
LEFTY2999NM_001172425.3AD
LMNA1995NM_170707.4AD, AR
MAP2K11182NM_002755.4AD
MYH65820NM_002471.4AR
MYH75808NM_000257.4AD, AR
NAA152601NM_057175.5AD
NKX2-6906NM_001136271.3AR
NODAL1044NM_018055.5AD
NOTCH17668NM_017617.5AD
NR2F21245NM_021005.4AD
NRAS570NM_002524.5AD
PRKD12739NM_002742.3AD
RAF11947NM_002880.4AD
ROBO14656NM_001145845.2AD
SCO2801NM_005138.3AR
SHROOM35991NM_020859.4AD
SMAD61491NM_005585.5AD
TLL11179NM_001204760.2AD
TRAF72013NM_032271.3AD
ZFPM23456NM_012082.4AD

Informations about the disease

Clinical Comment

Congenital heart disease (CHD) is the most common form of birth defects. The incidence of CHD is about 7.4-10/1000 in live births, probably ten times higher in preterm births and certainly even higher at earlier stages of pregnancy. Cardiovascular development is a complex process involving many genetic and usually still unknown environmental factors. The monogenic CHDs are often observed in association with de novo gene mutations, or they follow all inheritance patterns. The DNA- diagnostic yield is not known. Therefore, a negative result does not represent any exclusion of the clinical diagnosis.

Reference: https://pubmed.ncbi.nlm.nih.gov/31941532/

 

Synonyms
  • Alias: Prenatally unusual heart ultrasound findings
  • Allelic: 46XX sex reversal 5 (NR2F2)
  • Allelic: 46XY sex reversal 9 (ZFPM2)
  • Allelic: Alagille syndrome 1 (JAG1)
  • Allelic: Alagille syndrome 2 (NOTCH2)
  • Allelic: Blepharocheilodontic syndrome 2 (CTNND1)
  • Allelic: Brachydactyly, type A2 (BMP2)
  • Allelic: Cardiomyopathy, dilated, 1EE (MYH6)
  • Allelic: Cardiomyopathy, dilated, 1R (ACTC1)
  • Allelic: Cardiomyopathy, hypertrophic, 11 (ACTC1)
  • Allelic: Cardiomyopathy, hypertrophic, 14 (MYH6)
  • Allelic: Craniometaphyseal dysplasia, AR (GJA1)
  • Allelic: Craniosynostosis 7, susceptibility to (SMAD6)
  • Allelic: Cutis laxa, AD (ELN)
  • Allelic: Diaphragmatic hernia 3 (ZFPM2)
  • Allelic: Epidermolysis bullosa, lethal acantholytic (DSP)
  • Allelic: Erythrokeratodermia variabilis et progressiva 3 (GJA1)
  • Allelic: FG syndrome 2 (FLNA)
  • Allelic: HFE hemochromatosis, modifier of (BMP2)
  • Allelic: Hutchinson-Gilford progeria (LMNA)
  • Allelic: Hydroxykynureninuria (KYNU)
  • Allelic: Hypogonadotropic hypogonadism 5 with/-out anosmia (CHD7)
  • Allelic: Hypothyroidism, congenital nongoitrous, 5 (NKX2-5)
  • Allelic: Keratosis palmoplantaris striata II (DSP)
  • Allelic: Laing distal myopathy (MYH7)
  • Allelic: Left ventricular noncompaction 4 (ACTC1)
  • Allelic: Leukemia, Philadelphia chromosome+, resistant to imatinib (ABL1)
  • Allelic: Lipodystrophy, familial partial, type 2 (LMNA)
  • Allelic: Myopia 6 (SCO2)
  • Allelic: Neurodev. disorder, intention tremor, pyramidal signs, dyspraxia, ocular anomalies (SMG9)
  • Allelic: Oculodentodigital dysplasia AD + AR (GJA1)
  • Allelic: Palmoplantar keratoderma with congenital alopecia (GJA1)
  • Allelic: Radioulnar synostosis, nonsyndromic (SMAD6)
  • Allelic: Sick sinus syndrome 3 (MYH6)
  • Allelic: Skin fragility-woolly hair syndrome (DSP)
  • Allelic: Syndactyly, type III (GJA1)
  • Allelic: Testicular anomalies with/-out congenital heart disease (GATA4)
  • Allelic: Wolff-Parkinson-White syndrome (PRKAG2)
  • Adams-Oliver syndrome 5 (NOTCH1)
  • Aortic valve disease 1 (NOTCH1)
  • Aortic valve disease 2 (SMAD6)
  • Arrhythmogenic right ventricular dysplasia 8 (DSP)
  • Atrial septal defect 2 (GATA4)
  • Atrial septal defect 3 (MYH6)
  • Atrial septal defect 4 (TBX20)
  • Atrial septal defect 5 (ACTC1)
  • Atrial septal defect 6 (TLL1)
  • Atrial septal defect 7, with/-out AV conduction defects (NKX2-5)
  • Atrial septal defect 8 (CITED2)
  • Atrial septal defect 9 (GATA6)
  • Atrioventricular septal defect 3 (GJA1)
  • Atrioventricular septal defect 4 (GATA4)
  • Atrioventricular septal defect 5 (GATA6)
  • Atrioventricular septal defect, partial, with heterotaxy syndrome (CRELD1)
  • Atrioventricular septal defect, susceptibility to, 2 (CRELD1)
  • CHARGE syndrome (CHD7)
  • Cardiac valvular dysplasia 1 (PLD1)
  • Cardiac valvular dysplasia, XL (FLNA)
  • Cardiac, facial + digital anomalies with developmental delay (TRAF7)
  • Cardiac-urogenital syndrome (MYRF)
  • Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 1 (SCO2)
  • Cardiomyopathy, dilated, 1S (MYH7)
  • Cardiomyopathy, dilated, with woolly hair + keratoderma (DSP)
  • Cardiomyopathy, hypertrophic 6 (PRKAG2)
  • Cardiomyopathy, hypertrophic, 1 (MYH7)
  • Cardiovascular anomalies [panelapp] (CTNND1)
  • Ciliary dyskinesia, primary, 3, with or without situs inversus (DNAH5)
  • Cleft palate, cardiac defects + mental retardation (MESI2)
  • Congenital cardiac malformations [panelapp] (HYAL2)
  • Congenital heart defects + ectodermal dysplasia (PRKD1)
  • Congenital heart defects + skeletal malformations syndrome (ABL1)
  • Congenital heart defects, multiple types, 4 (NR2F2)
  • Congenital heart defects, multiple types, 5 (GATA5)
  • Congenital heart defects, nonsyndromic, 1, XL (ZIC3)
  • Congenital heart defects, nonsyndromic, 2 (TAB2)
  • Congenital myopathy 7A, myosin storage, AD (MYH7)
  • Congenital myopathy 7B, myosin storage, AR (MYH7)
  • Conotruncal anomaly face syndrome (TBX1)
  • Conotruncal heart malformations (NKX2-6)
  • Conotruncal heart malformations, variable (NKX2-5)
  • Cor triatriatum [panelapp] (HYAL2)
  • Deafness, congenital heart defects + posterior embryotoxon (JAG1)
  • DiGeorge syndrome (TBX1)
  • Dilated cardiomyopathy with woolly hair, keratoderma + tooth agenesis (DSP)
  • Encephalitis/encephalopathy, mild, with reversible myelin vacuolization (MYRF)
  • Glycogen storage disease of heart, lethal congenital (PRKAG2)
  • Hajdu-Cheney syndrome (NOTCH2)
  • Heart and brain malformation syndrome (SMG9)
  • Heart valve disease [MONDO:0002869] [panelapp] (ADAMTS19)
  • Heart-hand syndrome, Slovenian type (LMNA)
  • Heterotaxy (SHROOM3)
  • Heterotaxy syndrome (LEFTY2)
  • Heterotaxy, visceral, 1, XL (ZIC3)
  • Heterotaxy, visceral, 2, AD (CFC1)
  • Heterotaxy, visceral, 4, AD (ACVR2B)
  • Heterotaxy, visceral, 5 (NODAL)
  • Heterotaxy, visceral, 6, AR (CFAP53)
  • Heterotaxy, visceral, 7, AR (MMP21)
  • Holt-Oram syndrome (TBX5)
  • Hypoplastic left heart syndrome 1 (GJA1)
  • Hypoplastic left heart syndrome 2 (NKX2-5)
  • Impaired intellectual developm. + distinctive facial features +/- cardiac defects (MED13L)
  • Intellectual developmental disorder, cardiac defects + dysmorphic facies (TMEM94)
  • Kabuki syndrome 1 (KMT2D)
  • Kabuki syndrome 2 (KDM6A)
  • Left ventricular noncompaction 5 (MYH7)
  • Malouf syndrome (LMNA)
  • Mental retardation, AD 50 (NAA15)
  • Mult. joint dislocat., short stature, craniofacial dysmorph., with/-out cong. heart def. (B3GAT3)
  • Non-syndromic heart valve disease [panelapp] (ADAMTS19)
  • Noonan syndrome 14 (SPRED2)
  • Pancreatic agenesis + congenital heart defects (GATA6)
  • Persistent truncus arteriosus (GATA6)
  • Persistent truncus arteriosus (NKX2-6)
  • Pulmonary hypoplasia, abn. diaphragma, an-/microphthalmia, cardiac defects [panelapp] (WNT7B)
  • Right atrial isomerism [Ivemark] (GDF1)
  • Short stature, facial dysmorphism + skeletal anomalies with/-out cardiac anomalies (BMP2)
  • Sifrim-Hitz-Weiss syndrome (CHD4)
  • Structural heart defects + renal anomalies syndrome (TMEM260)
  • Supravalvar aortic stenosis (ELN)
  • Tetralogy of Fallot (GATA4, GATA6, JAG1, NKX2-5, ROBO1, ZFPM2)
  • VACTERL association, XL (ZIC3)
  • Velocardiofacial syndrome (TBX1)
  • Ventricular septal defect 1 (GATA4)
  • Ventricular septal defect 2 (CITED2)
  • Ventricular septal defect 3 (NKX2-5)
  • Vertebral, cardiac, renal + limb defects syndrome 1 (HAAO)
  • Vertebral, cardiac, renal + limb defects syndrome 2 (KYNU)
  • Vertebral, cardiac, renal, and limb defects syndrome 3 (NADSYN1)
  • Vertebral, cardiac, tracheoesophageal, renal, limb defects (WBP11)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined