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Interdisciplinary CompetenceMolecular Diagnostics
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IllnessPrenatal Noonan syndrome spectrum, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Prenatal Noonan syndrome spectrum containing 14 core candidate genes and altogether 21 curated genes according to the clinical signs

ID
PP0006
Number of genes
20 Accredited laboratory test
Examined sequence length
24,5 kb (Core-/Core-canditate-Genes)
43,2 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • Amniotic fluid (after amnocentesis)
  • Chorionic villus
  • Umbilical cord blood
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
BRAF2301NM_004333.6AD
CBL2721NM_005188.4AD
HRAS570NM_005343.4AD
KRAS567NM_004985.5AD
LZTR12523NM_006767.4AD, AR
MAP2K11182NM_002755.4AD
MAP2K21203NM_030662.4AD
NRAS570NM_002524.5AD
PTPN111782NM_002834.5AD
RAF11947NM_002880.4AD
RIT1660NM_006912.6AD
RRAS2384NM_012250.6AD
SOS14002NM_005633.4AD
SOS23999NM_006939.4AD
KAT6B6222NM_012330.4AD
MRAS636NM_001085049.3AD
NF18457NM_001042492.3AD
PPP1CB350NM_002709.3AD
SHOC21749NM_007373.4AD
SPRED11335NM_152594.3AD

Informations about the disease

Clinical Comment

Noonan syndrome causes numerous health problems and morphologic stigmata. The most common features include unusual facies (broad forehead, drooping eyelids, telecanthus), short stature and heart defects. The disease begins prenatally, although milder cases are not diagnosed until infancy. In the prenatal period, affected fetuses may have increased nuchal translucency, hygroma colli, hydrops fetalis, congenital heart and kidney defects and larger amounts of amniotic fluid. Later, hypertrophic cardiomyopathy, variable cognitive deficits and skeletal, ectodermal and hematologic abnormalities occur as well. Noonan syndrome is usually inherited in an autosomal dominant manner, with variable expressivity, and therefore penetrance rates that are difficult to determine. Genetically related (allelic) disorders include Noonan-like disorder, LEOPARD and cardiofaciocutaneous syndromes caused by mutations in several of the roughly dozen genes that also cause Noonan syndrome. PTPN11 mutations are found in about half of patients with Noonan syndrome, in the SOS1 gene in 13%, in the LZTR1 gene in ~8% and in each of the RAF1 and RIT1 genes in ~5%. Less than 5% of Noonan cases show KRAS mutations, and other "Noonan genes" are mutated in <1%. The diagnosis can be confirmed by molecular genetics in >85% of affected individuals, but a normal DNA test result does not exclude the clinical diagnosis.

Reference: https://www.ncbi.nlm.nih.gov/books/NBK1124/

 

Synonyms
  • Sympt.: Short stature, facial dysmorphism, spectrum of congenital heart defects
  • Alias: Female pseudo-Turner syndrome
  • Alias: Male Turner syndrome
  • Atypical Noonan syndrome (RRAS)
  • Cardiofaciocutaneous syndrome (BRAF)
  • Cardiofaciocutaneous syndrome 2 (KRAS)
  • Cardiofaciocutaneous syndrome 3 (MAP2K1)
  • Cardiofaciocutaneous syndrome 4 (MAP2K2)
  • Costello syndrome (HRAS)
  • Genitopatellar syndrome (KAT6B)
  • LEOPARD syndrome 1 (PTPN11)
  • LEOPARD syndrome 2 (RAF1)
  • LEOPARD syndrome 3 (BRAF)
  • Neurofibromatosis-Noonan syndrome (NF1)
  • Noonan syndrome 1 (PTPN11)
  • Noonan syndrome 11 (MRAS)
  • Noonan syndrome 12 (RRAS)
  • Noonan syndrome 2 + 10 (LZTR1)
  • Noonan syndrome 3 (KRAS)
  • Noonan syndrome 4 (SOS1)
  • Noonan syndrome 5 (RAF1)
  • Noonan syndrome 6 (NRAS)
  • Noonan syndrome 7 (BRAF)
  • Noonan syndrome 8 (RIT1)
  • Noonan syndrome 9 (SOS2)
  • Noonan syndrome-like disorder with loose anagen hair 2 (PPP1CB)
  • Noonan syndrome-like disorder with/-out juvenile myelomonocytic leukemia (CBL)
  • Noonan syndrome-like with loose anagen hair 1 (SHOC2)
  • SBBYSS syndrome (KAT6B)
Heredity, heredity patterns etc.
  • AD
  • AR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined