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Interdisciplinary CompetenceMolecular Diagnostics
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IllnessPancreatitis, chronic; differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Pankreatitis, chronic´, comprising 5 guideline-curated core genes or altogether 12 curated genes according to the clinical signs

ID
PP5101
Number of genes
10 Accredited laboratory test
Examined sequence length
11,5 kb (Core-/Core-canditate-Genes)
20,5 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
CASR3237NM_000388.4AD, AR
CFTR4443NM_000492.4AR
CLDN2694NM_001171092.1XLR
CPA11260NM_001868.4AD
CTRC807NM_007272.3AD
PRSS1744NM_002769.5AD
SPINK1240NM_003122.5AD
KRT81452NM_002273.4AR
TRPV62313NM_018646.6AR
UBR15250NM_174916.3AR

Informations about the disease

Clinical Comment

Familial pancreatitis is rare, begins with repeated attacks of inflammation usually in childhood, becomes chronic sooner or later after more frequent acute phases and leads to morphological changes in the pancreas. Complications include pancreatic fibrosis, exocrine insufficiency, diabetes mellitus (type 3c), chronic pain and possibly ductal adenocarcinoma. The onset and course of the disease and the complications vary considerably, and it is likely that so-called modifier genes and external influences play an important role in each patient. Hereditary pancreatitis is often inherited in an autosomal dominant manner (PRSS1 mutations), whereby rare variants can have a modifying effect in several genes (CTRC, CPA1, CEL, PRSS1 genes). More rarely, autosomal recessive inheritance is present (SPINK1, CFTR genes) or more frequently a multifactorial event (CFTR + SPINK1 or CFTR + CASR or CFTR + CTRC genes, etc.) The diagnostic yield depends on the clinical situation.

References: https://www.ncbi.nlm.nih.gov/books/NBK190101/

https://www.ncbi.nlm.nih.gov/books/NBK84399/

https://journals.lww.com/ajg/Fulltext/2020/03000/ACG_Clinical_Guideline__Chronic_Pancreatitis.9.aspx

 

Synonyms
  • Alias: Hereditary chronic pancreatitis; Pancreatitis, hereditary
  • Allelic: Azoospermia, obstructive, with nephrolithiasis (CLDN2)
  • Allelic: Diabetes mellitus [MONDO:0005015] (CELA3B)
  • Allelic: Epilepsy idiopathic generalized, susceptibility to, 8 (CASR)
  • Allelic: Pancreatic cancer (CELA3B)
  • Chronic Pancreatitis [MONDO:0005003] (CELA3B)
  • Cirrhosis, cryptogenic (KRT8)
  • Cirrhosis, noncryptogenic, susceptibility to (KRT8)
  • Fibrocalculous pancreatic diabetes, susceptibility to (SPINK1)
  • Hereditary chronic pancreatitis [panelapp] (CPA1)
  • Hyperparathyroidism, neonatal (CASR)
  • Hyperparathyroidism, transient neonatal (TRPV6)
  • Hypocalcemia, AD, with Bartter syndrome (CASR)
  • Hypocalcemia, AR (CASR)
  • Hypocalciuric hypercalcemia, type I (CASR)
  • Johanson-Blizzard syndrome (UBR1)
  • Maturity-onset diabetes of the young, type VIII (CEL)
  • Pancreatitis, chronic, susceptibility to (CTRC)
  • Pancreatitis, hereditary (CFTR, PRSS1)
  • Pancreatitis, hereditary (SPINK1)
  • Shwachman-Diamond syndrome [Lipomatosis of pancreas, congenital] (SBDS)
  • Tropical calcific pancreatitis (SPINK1)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined