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IllnessNeurodegeneration with brain iron accumulation, NBIA; differential diagnosis

Summary

Short information

A comprehensive panel for Neurodegeneration with brain iron accumulation, NBIA, differential diagnosis, containing 4 "core" genes, 8 "core candidate" genes and altogether 23 curated genes according to the clinical suspicion

ID
NP0710
Number of genes
16 Accredited laboratory test
Examined sequence length
18,0 kb (Core-/Core-canditate-Genes)
30,5 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
ATP13A23543NM_022089.4AR
C19orf12459NM_001031726.3AD, AR
COASY1695NM_025233.7AR
CP3198NM_000096.4AR
DCAF171563NM_025000.4AR
FA2H1119NM_024306.5AR
FTL528NM_000146.4AD, AR
PANK21713NM_153638.4AR
PLA2G62421NM_003560.4AR
RAB39B642NM_171998.4XLR
WDR451086NM_007075.4XL
CRAT1881NM_000755.5AR
KIF1A5073NM_004321.8AD, AR
PSEN11404NM_000021.4AD
REPS12467NM_001128617.3AR
SCP21644NM_002979.5AR

Informations about the disease

Clinical Comment

Neurodegeneration with brain iron accumulation (NBIA) represents a group of rare, genetic neurological disorders characterised by iron deposits in the basal ganglia, detectable by MRI e.g. in the globus pallidus and substantia nigra. NBIA may occur from infancy to adulthood. The disease can progress rapidly or slowly, with long periods of stability. The symptoms can vary widely from case to case. The clinical manifestations relate to muscle function and/or progressive movement disorders, e.g. dystonia, choreoathetosis, spasticity as well as parkinsonism. Progressive dystonia can lead to loss of speech as well as uncontrollable tongue biting, blepharospasm and torticollis. In most forms of NBIA, eye disorders occur in addition such as retinal degeneration and optic atrophy. Cerebral and cerebellar atrophy are also commonly observed. Beta-propeller protein-associated and pantothenate kinase-associated neurodegeneration together account for three quarters of NBIA. In some forms, there are developmental delays, especially regarding the motor skills. Among the cognitive impairments, thinking, perception and other mental processes are often relatively spared. All monogenic inheritance patterns are observed. If NBIA is suspected on the basis of MRI findings, the "core candidate gene panel" includes more than a dozen genes, the broader differential diagnosis about twice as many. Although the molecular genetic yield can reach 85%, a negative DNA test result does not exclude the clinical diagnosis.

Reference: https://www.ncbi.nlm.nih.gov/books/NBK121988/

 

Synonyms
  • Alias: Neurodegeneration with brain iron accumulation, NBIA
  • Allelic: Acne inversa, familial, 3 (PSEN1)
  • Allelic: Hyperostosis cranalis interna (SLC39A14)
  • Allelic: Myopathy, distal, with rimmed vacuoles (SQSTM1)
  • Alzheimer disease, type 3 (PSEN1)
  • Alzheimer disease, type 3, with spastic paraparesis + apraxia (PSEN1)
  • Alzheimer disease, type 3, with spastic paraparesis + unusual plaques (PSEN1)
  • Cardiomyopathy, dilated, 1U (PSEN1)
  • Cerebellar ataxia (CP)
  • Choreoacanthocytosis (VPS13A)
  • Dementia, frontotemporal (PSEN1)
  • Dystonia 28, childhood-onset (KMT2B)
  • Frontotemporal dementia +/or amyotrophic lateral sclerosis 3 (SQSTM1)
  • Fucosidosis (FUCA1)
  • Glutaricaciduria, type I (GCDH)
  • HARP [Hyperprebetalipoproteinemia, Acanthocyt., Retinit. pigment., Pallidal degen.] syndrome (PANK2)
  • Hemosiderosis, systemic, due to aceruloplasminemia (CP)
  • Hyperferritinemia-cataract syndrome (FTL)
  • Hypermanganesemia + dystonia 2 (SLC39A14)
  • Hypoceruloplasminemia, hereditary (CP)
  • Infantile neuroaxonal dystrophy 1 (PLA2G6)
  • Kufor-Rakeb syndrome (ATP13A2)
  • L-ferritin deficiency, AD + AR (FTL)
  • Leukoencephalopathy with dystonia + motor neuropathy (SCP2)
  • Mental retardation, XL 72 (RAB39B)
  • NESCAV [NEurodeg., Spasticity +/- Cerebellar Atrophy or cortical Visual impairment] syndrome (KIF1A)
  • Neurodegeneration with ataxia, dystonia + gaze palsy, childhood-onset (SQSTM1)
  • Neurodegeneration with brain iron accumulation 1 (PANK2)
  • Neurodegeneration with brain iron accumulation 2A, 2B (PLA2G6)
  • Neurodegeneration with brain iron accumulation 3 (FTL)
  • Neurodegeneration with brain iron accumulation 4 (C19orf12)
  • Neurodegeneration with brain iron accumulation 5 (WDR45)
  • Neurodegeneration with brain iron accumulation 6 (COASY)
  • Neurodegeneration with brain iron accumulation 7 (REPS1)
  • Neurodegeneration with brain iron accumulation 8 (CRAT)
  • Neurodegeneration, childhood-onset, with brain atrophy (UBTF)
  • Neuropathy, hereditary sensory, type IIC (KIF1A)
  • Paget disease of bone 3 (SQSTM1)
  • Parkinson disease 14, AR (PLA2G6)
  • Pick disease (PSEN1)
  • Pontocerebellar hypoplasia, type 12 (COASY)
  • Spastic paraplegia 30, AD (KIF1A)
  • Spastic paraplegia 30, AR (KIF1A)
  • Spastic paraplegia 35, AR (FA2H)
  • Spastic paraplegia 43, AR (C19orf12)
  • Spastic paraplegia 78, AR (ATP13A2)
  • Waisman syndrome (RAB39B)
  • Woodhouse-Sakati syndrome (DCAF17)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined