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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessNephrolithiasis, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Nephrolithiasis comprising 10 guideline-curated and altogether 35 curated genes

ID
NP0610
Number of genes
32 Accredited laboratory test
Examined sequence length
35,6 kb (Core-/Core-canditate-Genes)
56,5 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
AGXT1179NM_000030.3AR
APRT543NM_000485.3AR
ATP6V0A42523NM_020632.3AR
ATP6V1B11542NM_001692.4AR
CA2783NM_000067.3AR
CFTR4443NM_000492.4AR
CLCN52241NM_000084.5XLR
CLDN19675NM_148960.3AR
CYP24A11545NM_000782.5AR
GRHPR987NM_012203.2AR
HOGA1984NM_138413.4AR
HPRT1657NM_000194.3XLR
OCRL2706NM_000276.4XLR
PHEX2250NM_000444.6XL
SLC34A11920NM_003052.5AD, AR
SLC34A31800NM_080877.2AD, AR
SLC3A12058NM_000341.4AD, AR, digenisch
SLC4A12736NM_000342.4AD, AR
XDH4002NM_000379.4AR
BSND963NM_057176.3AR
CASR3237NM_000388.4AD, AR
CLDN16918NM_006580.4AR
FAM20A1212NM_001243746.2AR
HNF4A1359NM_175914.4AD
KCNJ11176NM_000220.6AR
SLC12A13300NM_000338.3AR
SLC22A121560NM_001276326.2AR
SLC2A91536NM_001001290.2AD, AR
SLC7A91464NM_014270.5AD, AR
SLC9A3R11077NM_004252.5AD
STRADA1185NM_001003786.3AR
VPS33B1854NM_018668.5AR

Informations about the disease

Clinical Comment

ORPHA:1652 Dent disease: Renal tubular disease characterized by manifestations of proximal tubule dysfunction

ORPHA:93622 Dent disease type 1; Prevalence: Unknown (<250 families)

ORPHA:93623 Dent disease type 2; Prevalence: Unknown (~20 cases)

ORPHA:244305 Dominant hypophosphatemia with nephrolithiasis or osteoporosis; Prevalence: <1/1 000 000 (>10 cases)

Increased risk in patients with primary hyperoxaluria, Cystiuria, CF, Lesch-Nyhan, renal tubular acidosis and Xanthinuria

 

Synonyms
  • Allelic: Diabetes mellitus, noninsulin-dependent (HNF4A)
  • Allelic: Epilepsy idiopathic generalized, susceptibility to, 8 (CASR)
  • Allelic: MODY, type I (HNF4A)
  • Allelic: Sensorineural deafness with mild renal dysfunction (BSND)
  • Adenine phosphoribosyltransferase deficiency (APRT)
  • Allelic: Bronchiectasis +/- elevated sweat chloride 1, modifier of (CFTR)
  • Allelic: Congenital bilateral absence of vas deferens (CFTR)
  • Allelic: Hypertrypsinemia, neonatal (CFTR)
  • Allelic: Pancreatitis, hereditary (CFTR)
  • Allelic: Sweat chloride elevation without CF (CFTR)
  • Amelogenesis imperfecta, type IG, enamel-renal syndrome (FAM20A)
  • Arthrogryposis, renal dysfunction + cholestasis 1 (VPS33B)
  • Arthrogryposis, renal dysfunction + cholestasis 2 (VIPAS39)
  • Bartter syndrome, type 1 (SLC12A1)
  • Bartter syndrome, type 2 (KCNJ1)
  • Bartter syndrome, type 4a (BSND)
  • Bartter syndrome, types 3 + 4b, digenic (CLCNKB)
  • Cystic fibrosis (CFTR)
  • Cystinuria (SLC3A1)
  • Dent disease 2 (OCRL)
  • Dent syndrome (CLCN5)
  • Distal renal tubular acidosis 1 (SLC4A1)
  • Distal renal tubular acidosis 2 with progressive sensorineural hearing loss (ATP6V1B1)
  • Distal renal tubular acidosis 3, with/-out sensorineural hearing loss (ATP6V0A4)
  • Distal renal tubular acidosis 4 with hemolytic anemia (SLC4A1)
  • Fanconi renotubular syndrome 2 (SLC34A1)
  • Fanconi renotubular syndrome 4, with maturity-onset diabetes of the young (HNF4A)
  • Hypercalcemia, infantile, 1 (CYP24A1)
  • Hypercalcemia, infantile, 2 (SLC34A1)
  • Hyperglycinuria (SLC36A2)
  • Hyperoxaluria, primary, type I (AGXT)
  • Hyperoxaluria, primary, type II (GRHPR)
  • Hyperoxaluria, primary, type III (HOGA1)
  • Hyperparathyroidism, neonatal (CASR)
  • Hyperuricemia, HRPT-related (HPRT1)
  • Hypocalcemia, AD (CASR)
  • Hypocalcemia, AD, with Bartter syndrome (CASR)
  • Hypocalciuric hypercalcemia, type I (CASR)
  • Hypomagnesemia 3, renal (CLDN16)
  • Hypomagnesemia 5, renal, with ocular involvement (CLDN19)
  • Hypomagnesemia 7, renal, +/- dilated cardiomyopathy (RRAGD)
  • Hypophosphatemic rickets, XLD (PHEX)
  • Iminoglycinuria, digenic (SLC36A2)
  • Lesch-Nyhan syndrome (HPRT1)
  • Nephrolithiasis type 1 (CLCN5)
  • Nephrolithiasis, calcium oxalate (SLC26A1)
  • Nephrolithiasis/osteoporosis, hypophosphatemic, 1 (SLC34A1)
  • Osteopetrosis, AR 3, with renal tubular acidosis (CA2)
  • Polyhydramnios, megalencephaly + symptomatic epilepsy (STRADA)
  • Proteinuria, low molecular weight, with hypercalciuric nephrocalcinosis (CLCN5)
  • Xanthinuria, type I (XDH)
  • Xanthinuria, type II (MOCOS)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • XLR
  • digenisch
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined