IllnessLi-Fraumeni syndrome, differential diagnosis
Summary
Comprehensive differential diagnostic panel for Li-Fraumeni syndrome comprising 1 guideline-curated and 3 additional or altogether 10 curated genes according to the clinical signs
32,4 kb (Extended panel: incl. additional genes)
- EDTA-anticoagulated blood (3-5 ml)
NGS +
[Sanger]
Gene panel
Selected genes
Name | Exon Length (bp) | OMIM-G | Referenz-Seq. | Heredity |
---|---|---|---|---|
CDKN2A | 471 | NM_000077.5 | AD, Sus | |
CHEK2 | 1632 | NM_007194.4 | AD | |
MDM2 | 1494 | NM_002392.5 | AD, AR | |
TP53 | 1182 | NM_000546.6 | AD | |
BRCA1 | 5592 | NM_007294.4 | AD, AR, Sus | |
BRCA2 | 10257 | NM_000059.4 | AD, AR, Sus | |
MLH1 | 2271 | NM_000249.4 | AR | |
MSH2 | 2805 | NM_000251.3 | AR, Sus | |
MSH6 | 4083 | NM_000179.3 | AR, Sus | |
PMS2 | 2589 | NM_000535.7 | Sus, AR |
Informations about the disease
Li-Fraumeni syndrome is a rare disorder that greatly increases the risk of developing several types of cancer, especially in children and young adults. These cancers include breast cancer, osteo- and soft tissue sarcomas, brain tumors, leukemias and adrenocortical carcinomas. Other cancers are also more common. Li-Fraumeni syndrome is inherited in an autosomal dominant manner. A very similar disorder, called Li-Fraumeni-like syndrome, has many of the features mentioned above. Li-Fraumeni syndrome is associated with mutations in the tumor suppressor gene TP53. Nearly 75% of families with the classic syndrome and about 25% with Li-Fraumeni-like syndrome have germline mutations in this gene. De novo mutations occur in 7-20% of cases. Other genetic and environmental factors also likely influence the cancer risk in Li-Fraumeni syndrome. Which genetic factors play a role in these cases is unclear. The genes for DNA mismatch repair, breast/ovarian cancer and CHEK2 are the most important differential diagnoses. In families characterised according to the strictest criteria, TP53 mutations are detected in 80% of cases. A negative TP53 test result does not exclude the clinical diagnosis.
References: https://www.ncbi.nlm.nih.gov/books/NBK1311/
- Alias: Sarcoma family syndrome (<45 years)...
- ...osteosarcomas, breast/brain tumors, leukemia, adrenocortical carcinoma
- Allelic: Bone marrow failure syndrome 5 (TP53)
- Allelic: Lessel-Kubisch syndrome (MDM2)
- Accelerated tumor formation, susceptibility to (MDM2)
- Adrenocortical carcinoma, pediatric (TP53)
- Allelic: Fanconi anemia, complementation group D1 (BRCA2)
- Allelic: Fanconi anemia, complementation group S (BRCA1)
- Basal cell carcinoma 7 (TP53)
- Breast + colorectal cancer, susceptibility to (CHEK2)
- Breast cancer, male, susceptibility to (BRCA2)
- Breast cancer, somatic (TP53)
- Breast cancer, susceptibility to (CHEK2)
- Breast-ovarian cancer, familial, 1 (BRCA1)
- Breast-ovarian cancer, familial, 2 (BRCA2)
- Choroid plexus papilloma (TP53)
- Colorectal cancer (TP53)
- Colorectal cancer, hereditary nonpolyposis, type 1 (MSH2)
- Colorectal cancer, hereditary nonpolyposis, type 2 (MLH1)
- Colorectal cancer, hereditary nonpolyposis, type 4 (PMS2)
- Colorectal cancer, hereditary nonpolyposis, type 5 (MSH6)
- Endometrial cancer, familial (MSH6)
- Glioblastoma 3 (BRCA2)
- Glioma susceptibility 1 (TP53)
- Hepatocellular carcinoma, somatic (TP53)
- Li-Fraumeni syndrome (CHEK2, TP53)
- Medulloblastoma (BRCA2)
- Melanoma + neural system tumor syndrome (CDKN2A)
- Melanoma, cutaneous malignant, 2 (CDKN2A)
- Melanoma-pancreatic cancer syndrome (CDKN2A)
- Mismatch repair cancer syndrome 1 (MLH1)
- Mismatch repair cancer syndrome 2 (MSH2)
- Mismatch repair cancer syndrome 3 (MSH6)
- Mismatch repair cancer syndrome 4 (PMS2)
- Muir-Torre syndrome (MLH1, MSH2)
- Nasopharyngeal carcinoma, somatic (TP53)
- Osteosarcoma (TP53)
- Osteosarcoma, somatic (CHEK2)
- Pancreatic cancer 2 (BRCA2)
- Pancreatic cancer, somatic (TP53)
- Pancreatic cancer, susceptibility to, 4 (BRCA1)
- Prostate cancer (BRCA2)
- Prostate cancer, familial, susceptibility to (CHEK2)
- Wilms tumor (BRCA2)
- AD
- AR
- Sus
- Multiple OMIM-Ps
Bioinformatics and clinical interpretation
No text defined