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IllnessHypogonadotropic hypogonadism, Kallmann syndrome; differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Kallmann syndrome, hypogonadotropic hypogonadism, containing 1 core gene , furthermore 15 core candidate genes and altogether 40 curated genes according to the clinical signs

ID
KP1010
Number of genes
39 Accredited laboratory test
Examined sequence length
29,4 kb (Core-/Core-canditate-Genes)
71,2 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
ANOS12043NM_000216.4XLR
CHD78994NM_017780.4AD
FEZF11428NM_001024613.4AR
FGF8735NM_033163.5AD, AR
FGFR12469NM_023110.3AR
GNRH1291NM_000825.3AR
GNRHR987NM_000406.3AR
IL17RD2220NM_017563.5AR
KISS1417NM_002256.4AR
KISS1R1197NM_032551.5AR
NSMF1587NM_015537.5AR
PROK2390NM_001126128.2AR, Oligo
PROKR21155NM_144773.4AR, Oligo
TAC3366NM_013251.4AR
TACR31398NM_001059.3AR
WDR113675NM_018117.12AD
AXL1881NM_001278599.2AD
CCDC1414895NM_173648.4AD
CLPP834NM_006012.4AR
CUL4B2742NM_003588.4XLR
DCAF171563NM_025000.4AR
DUSP61146NM_001946.4AD
FGF17651NM_003867.4AD
FLRT31950NM_198391.3AD
FSHB390NM_000510.4AR
GLI24761NM_005270.5AD
HESX1558NM_003865.3AD, AR
HS6ST11236NM_004807.3AD
KLB3135NM_175737.4AD
LHB426NM_000894.3AR
LHX41173NM_033343.4AD
NR0B11413NM_000475.5XL
POLR3B3402NM_018082.6AR
PROP1681NM_006261.5AR
SEMA3A2316NM_006080.3AD, Oligo
SEMA3E2328NM_012431.3Oligo
SEMA7A1959NM_001146029.3Ass
SOX101401NM_006941.4AD
SPRY4969NM_030964.5AD

Informations about the disease

Clinical Comment

Kallmann syndrome (KS) is a rare genetic disorder defined by delayed or absent puberty with impaired/absent sense of smell. Closely related is normosomal-idiopathic hypogonadotropic hypogonadism (nIHH). Both diseases lack the gonadotropin-releasing hormone. KS and nIHH occur in both sexes, men are diagnosed more frequently. Patients with KS/nIHH are typically noticed in adolescence due to delayed puberty. While reproductive symptoms predominate, facial abnormalities (cleft lip/palate), lack of a kidney, shortened fingers, numbness, bone and tooth defects and disturbed eye movements are also observed. All monogenic inheritance patterns are observed, the penetrance for the KS phenotype is virtually complete for some genes such as ANOS1 with respect to the core symptoms and high for recessively inherited forms. Comprehensive gene panel diagnostics reveal pathogenic sequence changes in up to 60% of affected individuals, a normal DNA result does not exclude clinical diagnosis.

Reference: https://www.ncbi.nlm.nih.gov/books/NBK1334/

 

Synonyms
  • *PROK/-R2 inheritance: https://eje.bioscientifica.com/downloadpdf/journals/eje/178/3/EJE-17-0749.pdf
  • Adrenal hypoplasia, congenital (NR0B1)
  • Allelic: 46XY sex reversal 2, dosage-sensitive (NR0B1)
  • Allelic: Blood group, John-Milton-Hagen system (SEMA7A)
  • Allelic: CHARGE syndrome (CHD7)
  • Allelic: Encephalocraniocutaneous lipomatosis; Hartsfield syndrome; Jackson-Weiss syndrome (FGFR1)
  • Allelic: Luteinizing hormone resistance, female (LHCGR)
  • Allelic: Osteoglophonic dysplasia; Pfeiffer syndrome; Trigonocephaly 1 (FGFR1)
  • Allelic: Precocious puberty, central, 1 (KISS1R)
  • Allelic: Precocious puberty, male (LHCGR)
  • CHARGE syndrome (SEMA3E)
  • Congenital hypogonadotropic hypogonadism [panelapp] (KLB)
  • Culler-Jones syndrome (GLI2)
  • Dworschak-Punetha neurodevelopmental syndrome (PLXNA1)
  • Growth hormone deficiency with pituitary anomalies (HESX1)
  • Holoprosencephaly 9 (GLI2)
  • Hypogonadotropic hypogonadism 1 with/-out anosmia; Kallmann syndrome 1 (ANOS1)
  • Hypogonadotropic hypogonadism 10 with/-out anosmia (TAC3)
  • Hypogonadotropic hypogonadism 11 with/-out anosmia (TACR3)
  • Hypogonadotropic hypogonadism 12 with/without anosmia (GNRH1)
  • Hypogonadotropic hypogonadism 13 with or without anosmia (KISS1)
  • Hypogonadotropic hypogonadism 14 with/-out anosmia (WDR11)
  • Hypogonadotropic hypogonadism 15 with/-out anosmia (HS6ST1)
  • Hypogonadotropic hypogonadism 16 with/-out anosmia (SEMA3A)
  • Hypogonadotropic hypogonadism 17 with/-out anosmia (SPRY4)
  • Hypogonadotropic hypogonadism 18 with/-out anosmia (IL17RD)
  • Hypogonadotropic hypogonadism 19 with/-out anosmia (DUSP6)
  • Hypogonadotropic hypogonadism 2 with/-out anosmia (FGFR1)
  • Hypogonadotropic hypogonadism 20 with/-out anosmia (FGF17)
  • Hypogonadotropic hypogonadism 21 with anosmia (FLRT3)
  • Hypogonadotropic hypogonadism 22, with/-out anosmia (FEZF1)
  • Hypogonadotropic hypogonadism 23 with/-out anosmia (LHB)
  • Hypogonadotropic hypogonadism 24 without anosmia (FSHB)
  • Hypogonadotropic hypogonadism 3 with/without anosmia (PROKR2)*
  • Hypogonadotropic hypogonadism 4 with/without anosmia (PROK2)*
  • Hypogonadotropic hypogonadism 5 with/-out anosmia (CHD7)
  • Hypogonadotropic hypogonadism 6 with/without anosmia (FGF8)
  • Hypogonadotropic hypogonadism 7 without anosmia (GNRHR)
  • Hypogonadotropic hypogonadism 8 with/-out anosmia (KISS1R)
  • Hypogonadotropic hypogonadism 9 with/-out anosmia (NSMF)
  • Hypogonadotropic hypogonadism without anosmia; normosmic IHH [panelapp] (CCDC141)
  • Leukodystrophy, hypomyelinating, 8, +/- oligodontia and/or hypogonadotropic hypogonadism (POLR3B)
  • Leydig cell hypoplasia with hypergonadotropic hypogonadism (LHCGR)
  • Leydig cell hypoplasia with pseudohermaphroditism (LHHCGR)
  • Mental retardation, XL, syndromic 15, Cabezas type (CUL4B)
  • Normosmic idiopathic hypogionadotrophic Hypogonadism [panelapp] (CCDC141)
  • PCWH syndrome (SOX10)
  • Perrault syndrome 3 (CLPP)
  • Pituitary hormone deficiency, combined, 2 (PROP1)
  • Pituitary hormone deficiency, combined, 3 (LHX3)
  • Pituitary hormone deficiency, combined, 4 (LHX4)
  • Pituitary hormone deficiency, combined, 5 (HESX1)
  • Septooptic dysplasia (HESX1)
  • Waardenburg syndrome, type 2E, with/-out neurologic involvement (SOX10)
  • Waardenburg syndrome, type 4C (SOX10)
  • Woodhouse-Sakati syndrome (DCAF17)
Heredity, heredity patterns etc.
  • AD
  • AR
  • Ass
  • Oligo
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined