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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
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IllnessHoloprosencephaly, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Holoprosencephaly comprising 11 guideline-curated genes and altogether 25 curated genes according to the clinical signs

ID
HP9949
Number of genes
18 Accredited laboratory test
Examined sequence length
22,6 kb (Core-/Core-canditate-Genes)
49,9 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
CDON3795NM_016952.5AD
DISP14575NM_032890.5AD
FGF8735NM_033163.5AD
FGFR12469NM_023110.3AD
GLI24761NM_005270.5AD
SHH1389NM_000193.4AD
SIX3999NM_005413.4AD
SUFU1455NM_016169.4AD
TGIF1819NM_173208.3AD
ZIC21599NM_007129.5AD
CNOT17401NM_001265612.2AD
DHCR71428NM_001360.3AR
DLL12172NM_005618.4AD
HS2ST11129NM_012262.4AR
PPP1R12A3321NM_001143885.2AD
PTCH14344NM_000264.5AD
SMC1A3702NM_006306.4XL
STAG23807NM_001042749.2XL

Informations about the disease

Clinical Comment

Non-syndromic holoprosencephaly patients often have microcephaly or macrocephaly, the latter based on hydrocephalus. Other external features may include cleft palate (+/-cleft lip), a single maxillary central incisor and microphthalmos or anophthalmos. The severity of the facial features is somewhat related to the severity of brain malformations. Some individuals exhibit only a microform of holoprosencephaly. Most patients have delayed development and intellectual disability, often with pituitary dysfunction causing diabetes insipidus, for example. Additional brain dysfunctions may cause seizures, feeding difficulties and problems regulating body temperature, heart rate and respiration as well as hyposmia/anosmia. Non-syndromic holoprosencephaly is usually inherited in an autosomal dominant manner, often with reduced penetrance. Mutations in ~20 genes can cause non-syndromic holoprosencephaly, barely ~15% of cases are due to mutations in the SHH, ZIC2, SIX3 or TGIF1 genes. De novo mutations are also observed. In most affected families, the causative gene mutation currently eludes the DNA analyses. More complex disorders with holoprosencephaly as an occasional finding include the syndromes of Kallman-2, Hartsfield, Stromme and Smith-Lemli-Opitz. A negative molecular genetic test result does certainly not exclude the clinical diagnosis.

Reference: https://www.ncbi.nlm.nih.gov/books/NBK1530/

 

Synonyms
  • Alias: "Cyclopia"
  • Alias: "Zyklopie"
  • Alias: Holoprosencephaly sequence
  • Alias: Isolated holoprosencephaly
  • Alias: Signs of arhinencephaly
  • Allelic: Basal cell nevus syndrome (PTCH1)
  • Allelic: Basal cell nevus syndrome (SUFU)
  • Allelic: Growth hormone deficiency with pituitary anomalies (HESX1)
  • Allelic: Jackson-Weiss syndrome (FGFR1)
  • Allelic: Medulloblastoma, desmoplastic (SUFU)
  • Allelic: Pituitary hormone deficiency, combined, 5 (HESX1)
  • Cornelia de Lange syndrome 3 (SMC3)
  • Cornelia de Lange syndrome 4 (RAD21)
  • Culler-Jones syndrome (GLI2)
  • Genitourinary and/or/ brain malformation syndrome (PPP1R12A)
  • Hartsfield syndrome (FGFR1)
  • Holoprosencephaly 10 (DISP1)
  • Holoprosencephaly 11 (CDON)
  • Holoprosencephaly 12, with/-out pancreatic agenesis (CNOT1)
  • Holoprosencephaly 13, XL (STAG2)
  • Holoprosencephaly 2 (SIX3)
  • Holoprosencephaly 3 (SHH)
  • Holoprosencephaly 4 (TGIF1)
  • Holoprosencephaly 5 (ZIC2)
  • Holoprosencephaly 7 (PTCH1)
  • Holoprosencephaly 9 (GLI2)
  • Holoprosencephaly spectrum, severe developmental delay, brain malformations [panelapp] (PLCH1)
  • Hypogonadotropic hypogonadism 2 with/-out anosmia (FGFR1)
  • Hypogonadotropic hypogonadism 6 with/-out anosmia (FGF8)
  • Joubert syndrome 32 (SUFU)
  • Kabuki syndrome 1 (KMT2D)
  • Microcephaly 7, primary, AR (STIL)
  • Microphthalmia with coloboma 5 (SHH)
  • Mullegama-Klein-Martinez syndrome (STAG2)
  • Mungan syndrome (RAD21)
  • Neurodevelopmental disorder with nonspecific brain abnormalities with/-out seizures (DLL1)
  • Neurofacioskeletal syndrome with/-out renal agenesis (HS2ST1)
  • Schizencephaly (SHH, SIX3)
  • Septooptic dysplasia (HESX1)
  • Single median maxillary central incisor (SHH)
  • Stromme syndrome (CENPF)
  • Vissers-Bodmer syndrome (CNOT1)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined