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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessFanconi anemia, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Fanconi anemia comprising 10 guideline-curated and altogether 24 curated genes according to the clinical signs

ID
FP0030
Number of genes
23 Accredited laboratory test
Examined sequence length
31,3 kb (Core-/Core-canditate-Genes)
69,8 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
BRCA210257NM_000059.4AR
BRIP13750NM_032043.3AR
FANCA4368NM_000135.4AR
FANCB2580NM_001018113.3XL
FANCC1677NM_000136.3AR
FANCE1611NM_021922.3AR
FANCF1125NM_022725.4AR
FANCG1869NM_004629.2AR
FANCI3987NM_001113378.2AR
BLM4254NM_000057.4AR
BRCA15592NM_007294.4AR
ERCC42751NM_005236.3AR
FANCL1128NM_018062.4AR
FANCM6147NM_020937.4AR
MAD2L2683NM_001127325.2AR
PALB23561NM_024675.4AR
RAD511023NM_001164269.2AD
RAD51C1131NM_058216.3AR
RFWD32337NM_018124.4AR
SLX45505NM_032444.4AR
TOP3A3006NM_004618.5AR
UBE2T594NM_014176.4AR
XRCC2843NM_005431.2AR

Informations about the disease

Clinical Comment

Fanconi anemia (FA) can affect many areas of the organism: Bone marrow insufficiency, physical and organ defects as well as increased risks for certain cancers. About 90% of FA patients have aplastic anemia with frequent infections due to neutropenia, thrombocytopenia, anemia, and may also develop a myelodysplastic syndrome. More than half of FA patients present with physical abnormalities such as hypopigmentation or café-au-lait spots. Other possible symptoms include malformed thumbs or forearms and additional skeletal problems including short stature, plus malformed or missing kidneys and other urinary tract defects, gastrointestinal abnormalities, heart defects, eye abnormalities such as small or specially shaped eyes and malformed ears with hearing loss. Patients may also have abnormal genitalia or other malformations of the reproductive system. Most affected males and about half of affected females are infertile. In addition, malformations of the central nervous system may be seen, including hydrocephalus or microcephaly. FA patients have an increased risk of developing acute myeloid leukemia or tumors of the head, neck, skin, gastrointestinal or genital tracts. The likelihood of developing one of these cancers ranges from 10-30%. Differential diagnosis often includes the pathophysiologically and clinically related autosomal recessive Bloom syndrome (incl. Bloom-like syndrome). FA is often inherited in an autosomal recessive, more rarely in dominant or X-linked recessive manner, but may also result from certain gene fusions. Although the vast majority of responsible mutations are detected when all known FA genes are included, very rare genetic abnormalities in additional genes are sometimes observed with similar clinical presentations. Also, a rare inconspicuous molecular genetic result does not exclude the clinical diagnosis with absolute certainty.

References: https://www.ncbi.nlm.nih.gov/books/NBK1401/

https://www.ncbi.nlm.nih.gov/books/NBK1398/

 

Synonyms
  • Alias: Fanconi Pancytopenia
  • Bloom syndrome (BLM)
  • Fanconi anemia, complementation group A (FANCA)
  • Fanconi anemia, complementation group B (FANCB)
  • Fanconi anemia, complementation group D1 (BRCA2)
  • Fanconi anemia, complementation group D2 (FANCD2)
  • Fanconi anemia, complementation group E (FANCE)
  • Fanconi anemia, complementation group F (FANCF)
  • Fanconi anemia, complementation group G (FANCG)
  • Fanconi anemia, complementation group I (FANCI)
  • Fanconi anemia, complementation group J (BRIP1)
  • Fanconi anemia, complementation group M (FANCM)
  • Fanconi anemia, complementation group N (PALB2)
  • Fanconi anemia, complementation group O (RAD51C)
  • Fanconi anemia, complementation group P (SLX4)
  • Fanconi anemia, complementation group Q (ERCC4)
  • Fanconi anemia, complementation group R (RAD51)
  • Fanconi anemia, complementation group S (BRCA1)
  • Fanconi anemia, complementation group T (UBE2T)
  • Fanconi anemia, complementation group U (XRCC2)
  • Fanconi anemia, complementation group V (MAD2L2)
  • Fanconi anemia, complementation group W (RFWD3)
  • MGRISCE2 [Bloom-like syndrome] (TOP3A)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined