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IllnessCowden syndrome, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Cowden syndrome comprising 1 guideline-curated core gene and 6 guideline-curated core candidate genes as well as altogether 15 curated genes according to the clinical signs

ID
CP0070
Number of genes
15 Accredited laboratory test
Examined sequence length
15,7 kb (Core-/Core-canditate-Genes)
33,4 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
AKT11443NM_005163.2AD
BMPR1A1599NM_004329.3AD
NF18457NM_001042492.3AD
PTEN1212NM_000314.8AD
SMAD41659NM_005359.6AD
STK111302NM_000455.5AD
FLCN1740NM_144997.7SMu
PIK3CA3207NM_006218.4AD
PTCH14344NM_000264.5AD
SDHB843NM_003000.3AD
SDHC510NM_003001.5AD
SDHD480NM_003002.4AD
SEC23B2304NM_006363.6AD
SUFU1455NM_016169.4AD, AR
WWP12792
  • No OMIM-Gs linked
NM_007013.4AD

Informations about the disease

Clinical Comment

Cowden syndrome is a genodermatosis characterised by multiple hamartomas in different tissues and an increased risk of malignant tumours of the breast, thyroid, endometrium, kidney and colon rectum. Disease manifestations usually appear between the second and third decade of life, but can occur at any age. 25% of cases are caused by germ line mutations in the phosphatase and tensin homologue gene (PTEN). Other etiologies include germ line promoter methylation of the KLLN gene (30% of PTEN negative cases), mutations in the SDHB, SDHC or SDHD genes (10% of cases) and mutations in the AKT1 and PIK3CA genes (10% of cases).

Reference: https://www.orpha.net/consor/cgi-bin/Disease_Search.php?lng=EN&data_id=243

 

Synonyms
  • Alias name: Cowden disease 1 (PTEN)
  • Alias name: Multiple C; PTEN hamartoma syndrome (PTEN)
  • Alias name: Multiple hamartoma syndrome (PTEN)
  • Alias: PHTS, PTEN-Hamartom-Tumor-Syndrom (PTEN)
  • Allelic: Apparently isolated Lhermitte-Duclos disease (PTEN)
  • Allelic: Dyserythropoietic anemia, congenital, type II (SEC23B)
  • Allelic: Gastrointestinal stromal tumor (SDHB)
  • Allelic: Holoprosencephaly 7 (PTCH1)
  • Allelic: Joubert syndrome 32 (SUFU)
  • Allelic: Leukemia, juvenile myelomonocytic (NF1)
  • Allelic: Macrocephaly, pseudopapilledema, multiple hemangiomata (PTEN)
  • Allelic: Macrocephaly/autism syndrome (PTEN)
  • Allelic: Medulloblastoma, desmoplastic (SUFU)
  • Allelic: Melanoma, malignant, somatic (STK11)
  • Allelic: Meningioma, familial, susceptibility to (SUFU)
  • Allelic: Myhre syndrome (SMAD4)
  • Allelic: Neurofibromatosis, familial spinal (NF1)
  • Allelic: Pancreatic cancer, somatic (SMAd4
  • Allelic: Pancreatic cancer, somatic (STK11)
  • Allelic: Paraganglioma + gastric stromal sarcoma (SDHB)
  • Allelic: Paragangliomas 4 (SDHB)
  • Allelic: Pheochromocytoma (SDHB)
  • Allelic: Pneumothorax, primary spontaneous (FLCN)
  • Allelic: Renal carcinoma, chromophobe, somatic (FLCN)
  • Allelic: Testicular tumor, somatic (STK11)
  • Allelic: Watson syndrome (NF1)
  • Bannayan-Riley-Ruvalcaba syndrome, Bannayan-Zonana syndrome (PTEN)
  • Basal cell carcinoma, somatic (PTCH1)
  • Basal cell nevus syndrome (PTCH1)
  • Basal cell nevus syndrome (SUFU)
  • Birt-Hogg-Dube syndrome (FLCN)
  • Breast cancer, somatic (AKT1)
  • Breast cancer, somatic (PIK3CA)
  • CLAPO [Lopez-Gutierrez] syndrome, somatic (PIK3CA)
  • CLOVE [Cong. Lipomatous Overgrowth, Vascular Malformations, Epid. nevi] syndrome, somatic (PIK3CA)
  • Carcinoid tumors, intestinal (SDHD)
  • Colorectal cancer, somatic (AKT1)
  • Colorectal cancer, somatic (FLCN)
  • Colorectal cancer, somatic (PIK3CA)
  • Cowden syndrome 1 (PTEN)
  • Cowden syndrome 2 (SDHB)
  • Cowden syndrome 3 (SDHD)
  • Cowden syndrome 4 (KLLN; methylation lost)
  • Cowden syndrome 5 (PIK3CA)
  • Cowden syndrome 6 (AKT1)
  • Cowden syndrome 7 (SEC23B)
  • Dysplastic gangliocytoma of cerebellum (PTEN)
  • Endometrial carcinoma, somatic (PTEN)
  • Gastric cancer, somatic (PIK3CA)
  • Gastrointestinal stromal tumor (SDHC)
  • Hepatocellular carcinoma, somatic (PIK3CA)
  • Juvenile polyposis of infancy, germline deletion (BMPR1A + PTEN)
  • Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome (SMAD4)
  • Keratosis, seborrheic, somatic (PIK3CA)
  • Macrodactyly, somatic (PIK3CA)
  • Malignant melanoma, somatic (PTEN)
  • Megalencephaly-capillary malformation-polymicrogyria syndrome, somatic (PIK3CA)
  • Merkel cell carcinoma, somatic (SDHD)
  • Neurofibromatosis, type 1 (NF1)
  • Neurofibromatosis-Noonan syndrome (NF1)
  • Nevus, epidermal, somatic (PIK3CA)
  • Nonsmall cell lung cancer, somatic (PIK3CA)
  • Ovarian cancer, somatic (AKT1)
  • Ovarian cancer, somatic (PIK3CA)
  • Paraganglioma + gastric stromal sarcoma (SDHC)
  • Paraganglioma + gastric stromal sarcoma (SDHD)
  • Paragangliomas 1, with/-out deafness (SDHD)
  • Paragangliomas 3 (SDHC)
  • Peutz-Jeghers syndrome (STK11)
  • Pheochromocytoma (SDHD)
  • Polyposis syndrome, hereditary mixed, 2 (BMPR1A)
  • Polyposis, juvenile intestinal (BMPR1A)
  • Polyposis, juvenile intestinal (SMAD4)
  • Prostate cancer, somatic (PTEN)
  • Proteus syndrome, somatic (AKT1)
  • Riley-Smith syndrome (PTEN)
  • Ruvalcaba-Myhre-Smith syndrome (PTEN)
  • Squamous cell carcinoma, head and neck, somatic (PTEN)
  • Thyroid carcinoma, follicular, somatic (PTEN)
Heredity, heredity patterns etc.
  • AD
  • AR
  • SMu
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined