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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessSpinal muscular atrophy; SMN1/SMN2 genes

Summary

Short information

2 guideline-curated single gene sequence analyses

ID
SP6755
Number of genes
2 Accredited laboratory test
Examined sequence length
1,8 kb (Core-/Core-canditate-Genes)
- (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
SMN1885NM_000344.4AR
SMN2885NM_017411.4Mod

Informations about the disease

Clinical Comment

Spinal muscular atrophy (SMA) is one of the most common autosomal recessive hereditary disorders in Europe with a statistical recurrence risk of 25%. SMA may be associated with early childhood death. The frequency of heterozygous carriers is reported to be 1/40 for the German population and ~1/50 worldwide (1,2). In the vast majority of affected children, loss of both SMN1 gene copies is the cause of disease. The parents then usually carry a deleted SMN1 gene copy on only one allele (obligatory heterozygosity). According to current knowledge, the different courses of SMA or the different ages of manifestation are significantly influenced by the number of copies of the chromosomally adjacent and nearly identical SMN2 gene present, with a broad spectrum of disease in addition to exceptions. Therefore, a phenotypic characterization also with regard to the now basic treatability and prognosis into "non-sitter", "sitter" and "walker" has been established, which also includes the aspect of a multisystem disease and the interdisciplinary therapeutic management (3, 4).

In the absence of functional SMN1 copies, the number of SMN2 copies mostly correlates with the severity of the disease pattern; patients with milder SMA phenotype have in respective studies more SMN2 copies than patients with severe SMA phenotype. Yet reliable prediction of the phenotype cannot be made, though being important for SMN2 copy number-dependent therapies (5).

SMA is, in principle, treatable. Antisense oligonucleotide, gene replacement and/or "SMA small molecule" therapies and their combination are available in appropriate neuromuscular centers with expertise in SMA treatment. Newborn screening with the possibility of very early presymptomatic causal therapy initiation has been introduced in Germany since October 1, 2021.

In Germany, in addition to prenatal diagnosis, newborn screening and early causal therapy with improved outcome, the option of preimplantation genetic diagnosis is also available as part of a human genetic counseling and multidisciplinary treatment concept for couples with an already affected child. Currently, rare point mutations in the SMN1 gene (~4% of cases) cannot be detected in newborn screening.

References

(1) doi: 10.3233/JND-190428

(2) doi: 10.1146/annurev-genom-102319-103602

(3) doi: 10.1016/j.nmd.2017.11.005

(4) doi: 10.1016/j.nmd.2017.11.004

(5) http://www.ncbi.nlm.nih.gov/books/NBK1352/

Translated with www.DeepL.com/Translator (free version)

 

Synonyms
  • Alias: Infantile spinal muscular atrophy
  • Alias: Proximal spinal muscular atrophy type 0, 1-4
  • Alias: Spinal muscular atrophy-0, -1-4 [SMA]
  • Alias: Werdnig-Hoffmann disease
  • Spinal muscular atrophy, type 0 [prenatal] (SMN1)
  • Spinal muscular atrophy, type III, modifier of (SMN2)
  • Spinal muscular atrophy-1 (SMN1)
  • Spinal muscular atrophy-2 (SMN1)
  • Spinal muscular atrophy-3 (SMN1)
  • Spinal muscular atrophy-4 (SMN1)
Heredity, heredity patterns etc.
  • AR
  • Mod
ICD10 Code

Bioinformatics and clinical interpretation

No text defined