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IllnessPrenatal VATER/VACTERL association, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for Prenatal VATER/VACTERL association containing 16 core candidate genes and altogether 44 curated genes according to the clinical signs

ID
PP0016
Number of genes
17 Accredited laboratory test
Examined sequence length
29,9 kb (Core-/Core-canditate-Genes)
41,9 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • Amniotic fluid (after amnocentesis)
  • Chorionic villus
  • Umbilical cord blood
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
CHD78994NM_017780.4AD
EFTUD22919NM_004247.4AD
FANCB2580NM_001018113.3Ass
HAAO871NM_012205.3AR
KYNU924NM_001032998.2AR
MYCN1395NM_005378.6AD
SALL13975NM_002968.3AD
SALL43162NM_020436.5AD
TBX51557NM_000192.3AD
TRAP12115NM_016292.3AR
ZIC31404NM_003413.4XLR
CHD45739NM_001273.5AD
FGF10627NM_004465.2AD
FGF8735NM_033163.5AD
HOXA131167NM_000522.5AD
PUF601551NM_078480.3AD
TBX32172NM_005996.4AD

Informations about the disease

Clinical Comment

Patients with VACTERL association (vertebral defects, anal atresia, cardiac defects, tracheoesophageal fistula, renal and limb anomalies) typically have at least 3 of these characteristic features postnatally. Affected individuals may have additional symptoms besides VACTERL symptoms. Vertebral defects are seen in 60-80% of individuals with VACTERL association, including fused vertebrae, missing or additional vertebrae. 60-90% of these patients suufer(ed) from anal stenosis or atresia, sometimes along with urogenital malformations. Cardiac defects occur in 40-80% of patients, ranging in severity from life-threatening to subtle. Tracheoesophageal fistulas are present in 50-80% of affected individuals. Renal abnormalities occur in 50-80%, e.g., unilateral or bilateral renal aplasia or maldeveloped kidneys with impaired function. Limb abnormalities are seen in 40-50% of patients. These abnormalities often include absent or missing thumbs or forearms and hands. Some of the features of the VACTERL association may be minimally expressed and therefore these are not recognized until later in childhood or adulthood. Most cases occur sporadically. A few affected individuals have family members with only 1-2 features. In these families, a clear pattern of inheritance is often absent. Several genetic and environmental factors likely play a role in determining the risk for or expression of this disorder.

Although the spectrum of clinical symptoms determined by ultrasound in prenatal VACTERL association is naturally less extensively studied, the proportions are similar to those of postnatal VACTERL distribution: Spinal defects (>40%), anal atresia ( ̴30%), cardiac defects (>70%), tracheoesophageal fistulae ( ̴30%), renal malformations (>60%), limb malformations ( ̴40%), 3 or more severe abnormalities (>90%).

Reference: https://www.ncbi.nlm.nih.gov/books/NBK5192/

 

Synonyms
  • Sympt.: VATER = Vertebral defefects [V], Anal atresia [A]...
  • Sympt.: VACTERL = VATER + Cardiac malformations + Limb anomalies
  • ...Tracheoesophageal fistula [T]- Esophageal atresia [E], Radial/Renal dysplasia [R]
  • CHARGE syndrome: Coloboma [C], Heart defect [H], Atresia choanae [A] ...
  • ... Retarded growth + development [R], Genital hypoplasia [G], Ear anomalies/deafness [E]
  • Allelic: Aplasia of lacrimal + salivary glands (FGF19)
  • Allelic: Congenital heart defects, nonsyndromic, 1, XL (ZIC3)
  • Allelic: Duane-radial ray syndrome (SALL4)
  • Allelic: Hand-foot-uterus syndrome (HOXA13)
  • Allelic: Heterotaxy, visceral, 1, XL (ZIC3)
  • Allelic: Hydroxykynureninuria (KYNU)
  • Allelic: Hypogonadotropic hypogonadism 5 with/-out anosmia (CHD7)
  • Allelic: Leukemia, acute promyelocytic (RARA)
  • Allelic: Polydactyly, postaxial, types A1 + B (GLI3)
  • Allelic: Polydactyly, preaxial, type IV (GLI3)
  • Allelic: Retinitis pigmentosa 71 (IFT172)
  • Allelic: Schizencephaly (SHH)
  • Allelic: Single median maxillary central incisor (SHH)
  • Alveolar capillary dysplasia with misalignment of pulmonary veins (FOXF1)
  • Amelia, posterior, with pelvic + pulmonary hypoplasia syndrome (TBX4)
  • Bardet-Biedl syndrome 20 (IFT172)
  • CHARGE syndrome (VHD7)
  • COACH syndrome 2 (CC2D2A)
  • Caudal duplication anomaly (AXIN1)
  • Cranioectodermal dysplasia 2 (WDR35)
  • Cryptophthalmos, unilateral or bilateral, isolated (FREM2)
  • Culler-Jones syndrome (GLI2)
  • Fanconi anemia, complementation group A (FANCA)
  • Fanconi anemia, complementation group B (FANCB)
  • Fanconi anemia, complementation group C (FANCC)
  • Fanconi anemia, complementation group D2 (FANCD2)
  • Fanconi anemia, complementation group E (FANCE)
  • Fanconi anemia, complementation group F (FANCF)
  • Feingold syndrome 1 (MYCN)
  • Fraser syndrome 2 (FREM2)
  • Greig cephalopolysyndactyly syndrome (GLI3)
  • Guttmacher syndrome (HOXA13)
  • Holoprosencephaly 3 (SHH)
  • Holoprosencephaly 9 (GLI2)
  • Holt-Oram syndrome (TBX5)
  • Hypogonadotropic hypogonadism 6 with/-out anosmia (FGF8)
  • IVIC syndrome (SALL4)
  • Ischiocoxopodopatellar syndrome with/-out pulmonary arterial hypertension (TBX4)
  • Joubert syndrome 27 (B9D1)
  • Joubert syndrome 9 (CC2D2A)
  • LADD syndrome (FGF10)
  • Mandibulofacial dysostosis, Guion-Almeida type (EFTUD2)
  • Meckel syndrome 6 (CC2D2A)
  • Meckel syndrome 9 (B9D1)
  • Microphthalmia with coloboma 5 (SHH)
  • Microphthalmia, syndromic 12 (RARB)
  • Microphthalmia, syndromic 3 (SOX2)
  • Mitchell-Riley s. [cong. diab., pancr. hypopl., intest. atresia, gallbladder a-/hypoplasia] (RFX6)
  • Opitz GBBB syndrome, type I (MID1)
  • Optic nerve hypoplasia + abnormalities of the central nervous system (SOX2)
  • Pallister-Hall syndrome (GLI3)
  • Pancreatic agenesis 2 (PTF1A)
  • Pancreatic and cerebellar agenesis (PTF1A)
  • Robinow syndrome, AD 1 (WNT5A)
  • Short-rib thoracic dysplasia 10 with/-out polydactyly (IFT172)
  • Short-rib thoracic dysplasia 3 with/-out polydactyly (DYNC2H1)
  • Short-rib thoracic dysplasia 7 with/-out polydactyly (WDR35)
  • Sifrim-Hitz-Weiss syndrome (CHD4)
  • Townes-Brocks branchiootorenal-like syndrome (SALL1)
  • Townes-Brocks syndrome 1 (SALL1)
  • Townes-Brocks syndrome 2 (DACT1)
  • Ulnar-mammary syndrome (TBX3)
  • VACTERL association, XL (ZIC3)
  • Verheij syndrome (PUF60)
  • Vertebral, cardiac, renal + limb defects syndrome 1 (HAAO)
  • Vertebral, cardiac, renal + limb defects syndrome 2 (KYNU)
Heredity, heredity patterns etc.
  • AD
  • AR
  • Ass
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined