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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessIntestinal failure / Diarrhea, differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for intestinal failure / Diarrhea comprising 10 or altogether 21 curated genes according to the clinical signs

ID
DP6658
Number of genes
19 Accredited laboratory test
Examined sequence length
26,8 kb (Core-/Core-canditate-Genes)
46,5 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
DGAT11467NM_012079.6AR
EPCAM945NM_002354.3AR
GUCY2C3222NM_004963.4AD
MYO5B5547NM_001080467.3AR
SKIC23741NM_006929.5AR
SKIC34695NM_014639.4AR
SLC26A32295NM_000111.3AR
SLC9A32505NM_004174.4AR
SPINT2588NM_001166103.2AR
STXBP21773NM_006949.4AR
ANO13232NM_018043.6AR
AP1S1477NM_001283.5AR
CLMP1122NM_024769.5AR
FLNA7920NM_001456.4XL
FOXP31296NM_014009.4XLR
NEUROG3645NM_020999.4AR
PLVAP1335NM_031310.3AR
STX31048NM_001178040.2AR
TTC7A2577NM_020458.4AR

Informations about the disease

Clinical Comment

Childhood diarrhoea is a common condition caused, for example, by bacterial or viral infections, allergies or dietary intolerances and rarely has significant long-term consequences. Congenital diarrhoea and enteropathies represent a heterogeneous group of severe inherited diseases that present with devastating chronic diarrhoea in the first months of life and often require supported feeding and comprehensive medical care due to electrolyte disturbances or growth retardation resulting from malabsorption. Diseases with early-onset refractory diarrhoea include exudative diarrhoea associated with very early-onset inflammatory bowel disease (IBD), osmotic or secretory diarrhoea and protein-losing enteropathy. Monogenic diarrhoea is more common among the very early-onset chronic conditions, certainly in children under 6 years of age. Tending to be diagnosed as indeterminate colitis, Crohn's disease and ulcerative colitis are usually excluded first. Osmotic or secretory diarrhoea is mainly caused by impaired absorption and inadequate transport of nutrients or electrolytes and differentiation and polarisation of intestinal cells. Protein-losing diarrhoea is a mucosal disorder caused by IBD, infection, metabolic disease, other genetic abnormalities or primary intestinal lymphangiectasia. Most congenital diarrhoeal diseases and enteropathies are inherited in an autosomal recessive manner. The molecular genetic yield is rarely >20%, depending on the cohort and previous clinical characterisation. Therefore, a negative DNA test result does not exclude the clinical diagnosis.

Reference: https://www.gastrojournal.org/article/S0016-5085(18)30440-2/fulltext

 

Synonyms
  • Alias: Chronischer Durchfall beim Kleinkind
  • Alias: Congenital short bowel syndrome
  • Alias: Familial Diarrhea
  • Alias: Familiäre Diarrhoe
  • Alias: Kongenitales Kurzdarmsyndrom
  • Alias: [Angeborene] Durchfallerkrankung
  • Alias: [Congenital] diarrheal disorder
  • Allelic: Cardiac valvular dysplasia, XL (FLNA)
  • Allelic: Colorectal cancer, hereditary nonpolyposis, type 8 (EPCAM)
  • Allelic: FG syndrome 2 (FLNA)
  • Allelic: Frontometaphyseal dysplasia 1 (FLNA)
  • Allelic: Heterotopia, periventricular, 1 (FLNA)
  • Allelic: Intestinal pseudoobstruction, neuronal (FLNA)
  • Allelic: Melnick-Needles syndrome (FLNA)
  • Allelic: Otopalatodigital syndrome, type I (FLNA)
  • Allelic: Otopalatodigital syndrome, type II (FLNA)
  • Allelic: Terminal osseous dysplasia (FLNA)
  • Congenital short bowel syndrome (CLMP)
  • Congenital short bowel syndrome (FLNA)
  • Diarrhea 1, secretory chloride, congenital (SLC26A3)
  • Diarrhea 10, protein-losing enteropathy type (PLVAP)
  • Diarrhea 11, malabsorptive, congenital (PERCC1; Int. Control Region deletion)
  • Diarrhea 12, with microvillus atrophy (STX3)
  • Diarrhea 2, with microvillus atrophy, with/-out cholestasis (MYO5B)
  • Diarrhea 3, secretory sodium, congenital, syndromic (SPINT2)
  • Diarrhea 4, malabsorptive, congenital (NEUROG3)
  • Diarrhea 5, with tufting enteropathy, congenital (EPCAM)
  • Diarrhea 6 (GUCY2C)
  • Diarrhea 7, protein-losing enteropathy type (DGAT1)
  • Diarrhea 8, secretory sodium, congenital (SLC9A3)
  • Diarrhea 9 (WNT2B)
  • Enterokinase deficiency (TMPRSS15)
  • Gastrointestinal defects and immunodeficiency syndrome (TTC7A)
  • Hemophagocytic lymphohistiocytosis, familial, 5 (STXBP2)
  • Immunodysregulation, polyendocrinopathy + enteropathy, XL (FOXP3)
  • Impaired intestinal peristalsis, haemorrhagic diarrhoea, dysmorphic features [panelapp] (ANO1)
  • MEDNIK [MR, Enteropathy, Deaf, periph. Neuropathy, Ichthyosis, Keratoderma] syndrome (WNT2B)
  • Meconium ileus (GUCY2C)
  • Microvillus inclusion disease (MYO5B)
  • Microvillus inclusion disease; diarrheal disorder [MONDO} (STX3)
  • Retinal dystrophy + microvillus inclusion disease (STX3)
  • Trichohepatoenteric syndrome 1 (TTC37)
  • Trichohepatoenteric syndrome 2 (SKIV2L)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined