©istock.com/Andrea Obzerova
Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessGastrointestinal tumors, monogeneic; differential diagnosis

Summary

Short information

Comprehensive differential diagnostic panel for monogenic gastrointestinal tumors comprising 6 core candidate genes and altogether 22 curated genes according to the clinical signs

ID
GP4488
Number of genes
20 Accredited laboratory test
Examined sequence length
22,0 kb (Core-/Core-canditate-Genes)
72,5 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

[Sanger]

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
APC8532NM_000038.6AD
MLH12271NM_000249.4AD, AR
MSH22805NM_000251.3AD, Sus
MSH64083NM_000179.3AD, Sus
MUTYH1650NM_001128425.2AR, Sus
PMS22589NM_000535.7AD, Sus, AR
AKT11443NM_005163.2AD
ATM9171NM_000051.4AR
BMPR1A1599NM_004329.3AD
BRCA15592NM_007294.4n.k.
BRCA210257NM_000059.4n.k.
CDH12649NM_004360.5n.k.
EPCAM945NM_002354.3AD
NTHL1915NM_002528.7AR
PALB23561NM_024675.4AD
POLD13324NM_002691.4AD
POLE6861NM_006231.4AD
PTEN1212NM_000314.8AD
SMAD41659NM_005359.6AD
STK111302NM_000455.5AD

Informations about the disease

Synonyms
  • Alias: GI tract tumours
  • Allelic: Adenoma, periampullary, somatic (APC)
  • Allelic: Blepharocheilodontic syndrome 1 (CDH1)
  • Allelic: Brain tumor-polyposis syndrome 2 (APC)
  • Allelic: Breast cancer, lobular (CDH1)
  • Allelic: Desmoid disease, hereditary (APC)
  • Allelic: Diarrhea 5, with tufting enteropathy, congenital (EPCAM)
  • Allelic: Endometrial cancer, familial (MSH6)
  • Allelic: Endometrial carcinoma, somatic (CDH1)
  • Allelic: FILS syndrome (POLE)
  • Allelic: Gastric cancer, hereditary diffuse, with/-out cleft lip and/or palate (CDH1)
  • Allelic: Gastric cancer, somatic (APC)
  • Allelic: Gastric cancer, somatic (MUTYH)
  • Allelic: Glioma susceptibility 2 (PTEN)
  • Allelic: Hepatoblastoma, somatic (APC)
  • Allelic: IMAGE-I syndrome (POLE)
  • Allelic: Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome (SMAD4)
  • Allelic: Macrocephaly/autism syndrome (PTEN)
  • Allelic: Mandibular hypoplasia, deafness, progeroid features, lipodystrophy syndrome (POLD1)
  • Allelic: Melanoma, malignant, somatic (STK11)
  • Allelic: Meningiom (PTEN)
  • Allelic: Mismatch repair cancer syndrome (MLH1, MSH2, MSH6, PMS2)
  • Allelic: Muir-Torre syndrome (MLH1, MSH2)
  • Allelic: Myhre syndrome (SMAD4)
  • Allelic: Ovarian cancer, somatic (CDH1)
  • Allelic: Pancreatic cancer, somatic (SMAD4)
  • Allelic: Pancreatic cancer, somatic (STK11)
  • Allelic: Prostate cancer, somatic (PTEN)
  • Allelic: Prostate cancer, susceptibility to (CDH1)
  • Allelic: Testicular tumor, somatic (STK11)
  • Adenomas, multiple colorectal (MUTYH)
  • Adenomatous polyposis coli (APC)
  • Allelic: Breast cancer, susceptibility to (ATM)
  • Allelic: Breast cancer, susceptibility to (PALB2)
  • Allelic: Breast-ovarian cancer, familial, 1 (BRCA1)
  • Allelic: Breast-ovarian cancer, familial, 2 (BRCA2)
  • Allelic: Fanconi anemia, complementation group D1 (BRCA2)
  • Allelic: Fanconi anemia, complementation group N (PALB2)
  • Allelic: Fanconi anemia, complementation group S (BRCA1)
  • Allelic: Uveal melanoma, susceptibility to, 1 (MBD4)
  • Allelic: Wilms tumor (BRCA2)
  • Ataxia-telangiectasia (ATM)
  • Colorectal cancer, hereditary nonpolyposis, type 1 (MSH2)
  • Colorectal cancer, hereditary nonpolyposis, type 2 (MLH1)
  • Colorectal cancer, hereditary nonpolyposis, type 4 (PMS2)
  • Colorectal cancer, hereditary nonpolyposis, type 5 (MSH6)
  • Colorectal cancer, hereditary nonpolyposis, type 8 (EPCAM)
  • Colorectal cancer, somatic (APC)
  • Colorectal cancer, susceptibility to, 10 (POLD1)
  • Colorectal cancer, susceptibility to, 12 (POLE)
  • Cowden syndrome 1 (PTEN)
  • Familial adenomatous polyposis 1 (APC)
  • Familial adenomatous polyposis 2 (MUTYH)
  • Familial adenomatous polyposis 3 (NTHL1)
  • Gardner syndrome (APC)
  • Juvenile polyposis syndrome, infantile form (BMPR1A)
  • Lhermitte-Duclos syndrome (PTEN)
  • Melanoma-pancreatic cancer syndrome (CDKN2A)
  • Pancreatic cancer 2 (BRCA2)
  • Pancreatic cancer, susceptibility to, 3 (PALB2)
  • Pancreatic cancer, susceptibility to, 4 (BRCA1)
  • Peutz-Jeghers syndrome (STK11)
  • Polyposis syndrome, hereditary mixed, 2 (BMPR1A)
  • Polyposis, juvenile intestinal (BMPR1A)
  • Polyposis, juvenile intestinal (SMAD4)
  • Tumor predisposition syndrome 2 (MBD4)
Heredity, heredity patterns etc.
  • AD
  • AR
  • Sus
  • n.k.
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined