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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessGastroenterologic epithelial barrier disorders

Summary

Short information

Comprehensive differential diagnostic panel for gastroenterologic epithelial barrier disorders comprising 23 or 56 curated genes according to the clinical signs

ID
GP3039
Number of genes
53 Accredited laboratory test
Examined sequence length
29,0 kb (Core-/Core-canditate-Genes)
125,7 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
CD40LG786NM_000074.3XLR
CTLA4525NM_001037631.3AD
CYBA588NM_000101.4AR
CYBB1713NM_000397.4XLR
DCLRE1C2079NM_001033855.3AR
EPCAM945NM_002354.3AR
FOXP31296NM_014009.4XLR
ICOS600NM_012092.4AR
IL10537NM_000572.3AR
IL10RA1737NM_001558.4AR
IL10RB978NM_000628.5AR
IL2RA819NM_000417.3AR
IL2RG1110NM_000206.3XLR
MVK1191NM_000431.4AR
NCF11173NM_000265.6AR
RAG21584NM_000536.4AR
SH2D1A378NM_001114937.3XL
SLC37A41291NM_001164277.2AR
STAT32313NM_139276.3AD
STXBP21773NM_006949.4AR
TTC7A2577NM_020458.4AR
WAS1509NM_000377.3XL
XIAP1494NM_001167.4XL
ADA1092NM_000022.4AR
ADAM172475NM_003183.6AR
COL7A18835NM_000094.4AR
DOCK86300NM_203447.4AR
FERMT12034NM_017671.5AR
GUCY2C3222NM_004963.4AD, AR
HPS12103NM_000195.5AR
HPS42127NM_022081.6AR
HPS62328NM_024747.6AR
ITGB22310NM_000211.5AR
LIG42736NM_002312.3AR
LRBA8556NM_001199282.2AR
MEFV2346NM_000243.3AD, AR
MYO5B5547NM_001080467.3AR
NCF21581NM_000433.4AR
NCF41020NM_000631.5AR
NOD23123NM_022162.3AD
OTULIN1066NM_138348.6AR
PIK3CD3135NM_005026.5AR
PIK3R12175NM_181523.3AD, AR
PLCG23798NM_002661.5AD
PTEN1212NM_000314.8AD
RAG13132NM_000448.3AR
RET3345NM_020975.6AD, AR
RTEL13732NM_032957.5AD, AR
SAMD94770NM_001193307.2AD
SKIC23741NM_006929.5AR
SKIC34695NM_014639.4AR
STAT12253NM_007315.4AD, AR
ZAP701860NM_001079.4AR

Informations about the disease

Synonyms
  • Allelic: Autoimmune lymphoproliferative syndrome, type V (CTLA4)
  • Allelic: Central hypoventilation syndrome, congenital (RET)
  • Allelic: Colorectal cancer, hereditary nonpolyposis, type 8 (EPCAM)
  • Allelic: Diabetes mellitus, insulin-dependent, 12 (CTLA4)
  • Allelic: Diabetes, mellitus, insulin-dependent, susceptibility to, 10 (IL2RA)
  • Allelic: Epidermolysis bullosa pruriginosa (COL7A1)
  • Allelic: Epidermolysis bullosa, pretibial (COL7A1)
  • Allelic: Glioma susceptibility 2 (PTEN)
  • Allelic: Graft-versus-host disease, protection against (IL10)
  • Allelic: HIV-1, susceptibility to (IL10)
  • Allelic: Hashimoto thyroiditis (CTLA4)
  • Allelic: Hepatitis B virus, susceptibility to (IL10RB)
  • Allelic: Macrocephaly/autism syndrome (PTEN)
  • Allelic: Medullary thyroid carcinoma (RET)
  • Allelic: Meningioma (PTEN)
  • Allelic: Monosomy 7 myelodysplasia + leukemia syndrome 2 (SAMD9)
  • Allelic: Multiple endocrine neoplasia IIA (RET)
  • Allelic: Multiple endocrine neoplasia IIB (RET)
  • Allelic: Multiple myeloma, resistance to (LIG4)
  • Allelic: Neutrophilic dermatosis, acute febrile (MEFV)
  • Allelic: Pheochromocytoma (RET)
  • Allelic: Porokeratosis 3, multiple types (MVK)
  • Allelic: Prostate cancer, somatic (PTEN)
  • Allelic: Rheumatoid arthritis, progression of (IL10)
  • Allelic: Severe combined immunodeficiency due to ADA deficiency (ADA)
  • Allelic: Thrombocytopenia, XL (WAS)
  • Allelic: Thrombocytopenia, XL, intermittent (WAS)
  • Allelic: Toenail dystrophy, isolated (COL7A1)
  • Allelic: Transient bullous of the newborn (COL7A1)
  • Adenosine deaminase deficiency, partial (ADA)
  • Allelic: Tumoral calcinosis, familial, normophosphatemic (SAMD9)
  • Alpha/beta T-cell lymphopenia, g/d T-cell expansion, severe cytomegalov. inf. + autoimmunity (RAG1)
  • Autoimmune disease, multisystem, infantile-onset, 1 (STAT3(
  • Autoimmune disease, multisystem, infantile-onset, 2 (ZAP70)
  • Autoinflammation, antibody deficiency + immune dysregulation syndrome (PLCG2)
  • Autoinflammation, panniculitis + dermatosis syndrome (OTULIN)
  • Blau syndrome (NOD2)
  • Celiac disease, susceptibility to, 3 (CTLA4)
  • Chronic granulomatous disease 1, AR (NCF1)
  • Chronic granulomatous disease 2, AR (NCF2)
  • Chronic granulomatous disease 3, AR (NCF4)
  • Chronic granulomatous disease 4, AR (CYBA)
  • Chronic granulomatous disease, XL (CYBB)
  • Combined cellular + humoral immune defects with granulomas (RAG1, RAG2)
  • Combined immunodeficiency, XL, moderate (IL2RG)
  • Cowden syndrome 1 (PTEN)
  • Diarrhea 5, with tufting enteropathy, congenital (EPCAM)
  • Diarrhea 6 (GUCY2C)
  • Dyskeratosis congenita, AD 4 (RTEL1)
  • Dyskeratosis congenita, AR 5 (RTEL1)
  • Ectodermal dysplasia + immunodeficiency 1 (IKBKG)
  • Epidermolysis bullosa dystrophica inversa (COL7A1)
  • Epidermolysis bullosa dystrophica, AD (COL7A1)
  • Epidermolysis bullosa dystrophica, AR (COL7A1)
  • Epidermolysis bullosa dystrophica, Bart type (COl7A1)
  • Epidermolysis bullosa dystrophica, localisata variant (COL7A1)
  • Familial Mediterranean fever, AD (MEFV)
  • Familial Mediterranean fever, AR (MEFV)
  • Familial cold autoinflammatory syndrome 3 (PLCG2)
  • Gastrointestinal defects and immunodeficiency syndrome (TTC7A)
  • Glycogen storage disease IB + Ic (SLC37A4)
  • Hemophagocytic lymphohistiocytosis, familial, 5 (STXBP2)
  • Hermansky-Pudlak syndrome 1 (HPS1)
  • Hermansky-Pudlak syndrome 4 (HPS4)
  • Hermansky-Pudlak syndrome 6 (HPS6)
  • Hirschsprung disease, protection against (RET)
  • Hirschsprung disease, susceptibility to, 1 (RET)
  • Hyper-IgD syndrome (MVK)
  • Hyper-IgE recurrent infection syndrome (STAT3)
  • Hyper-IgE recurrent infection syndrome, AR (DOCK8)
  • Immunodeficiency 14 (PIK3CD)
  • Immunodeficiency 31A, mycobacteriosis, AD (STAT1)
  • Immunodeficiency 31B, mycobacterial and viral infections, AR (STAT1)
  • Immunodeficiency 31C, chronic mucocutaneous candidiasis, AD (STAT1)
  • Immunodeficiency 33 (IKBKG)
  • Immunodeficiency 34, mycobacteriosis, XL (CYBB)
  • Immunodeficiency 41 with lymphoproliferation + autoimmunity (IL2RA)
  • Immunodeficiency 48 (ZAP70)
  • Immunodeficiency, XL, with hyper-IgM (CD40LG)
  • Immunodeficiency, common variable, 1 (ICOS)
  • Immunodeficiency, common variable, 8, with autoimmunity (LRBA)
  • Immunodysregulation, polyendocrinopathy + enteropathy, XL (FOXP3)
  • Incontinentia pigmenti (IKBKG)
  • Inflammatory bowel disease 1, Crohn disease (NOD2)
  • Inflammatory bowel disease 25, early onset, AR (IL10RB)
  • Inflammatory bowel disease 28, early onset, AR (IL10RA)
  • Inflammatory skin + bowel disease, neonatal, 1 (ADAM17)
  • Intestinal dysmotility syndrome (ANO1)
  • Kindler syndrome (FERMT1)
  • LIG4 syndrome (LIG4)
  • Leukocyte adhesion deficiency (ITGB2)
  • Lhermitte-Duclos syndrome (PTEN)
  • Lymphoproliferative syndrome, XL, 1 (SH2D1A)
  • Lymphoproliferative syndrome, XL, 2 (XIAP)
  • MIRAGE syndrome (SAMD9)
  • Meconium ileus (GUCY2C)
  • Mevalonic aciduria (MVK)
  • Microvillus inclusion disease (MYO5B)
  • Neutropenia, severe congenital, X (WAS)
  • Omenn syndrome (DCLRE1C, RAG1, RAG2)
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 (RTEL1)
  • Severe combined immunodeficiency, Athabascan type (DCLRE1C)
  • Severe combined immunodeficiency, B cell-negative (RAG1, RAG2)
  • Severe combined immunodeficiency, XL (IL2RG)
  • Systemic lupus erythematosus, susceptibility to (CTLA4)
  • Trichohepatoenteric syndrome 1 (TTC37)
  • Trichohepatoenteric syndrome 2 (SKIC2L)
  • Wiskott-Aldrich syndrome (WAS)
  • Yao syndrome (NOD2)
Heredity, heredity patterns etc.
  • AD
  • AR
  • XL
  • XLR
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined