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IllnessAzoospermia syndrome, differential diagnosis [expanded]

Summary

Short information

Comprehensively expanded gene panel for the differential diagnosis of azoospermia comprising 5 guideline-curated and altogether 83 curated genes according to the clinical symptoms

ID
AP4539
Number of genes
62 Accredited laboratory test
Examined sequence length
20,9 kb (Core-/Core-canditate-Genes)
252,2 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications

NGS +

 

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
ADGRG23081NM_001079858.3XL
AR2763NM_000044.6XLR
CFTR4443NM_000492.4AR
DMRT11122NM_021951.3n.k.
NR5A11386NM_004959.5AD
SYCP3711NM_153694.5AD
TEX112822NM_031276.3XLR
TEX144476NM_198393.4AR
ACTL91252NM_178525.5AR
AK72172NM_152327.5AR
ARMC22649NM_032131.6AR
AURKC930NM_001015878.2AR
BRDT2874NM_001242805.2AR
C14orf391890NM_174978.3AR
CATIP1207NM_198559.2AR
CATSPER12343NM_053054.4AR
CEP1123295NM_001199165.4AR
CFAP2513505NM_144668.6AR
CFAP435231NM_025145.7AR
CFAP445815NM_001164496.2AR
CFAP479965NM_152632.4XLR
CFAP582885NM_001008723.2n.k.
CFAP656298NM_194302.4AR
CFAP692914NM_001039706.3AR
CFAP703461NM_001367801.1AR
CFAP912405NM_033364.4AR
CYP21A21488NM_000500.9AR
DNAH112798NM_015512.5AR
DNAH1713481NM_173628.4AR
DNAH214421NM_020877.5AR
DNAH814527NM_001206927.2AR
DPY19L22277NM_173812.5AR
DZIP12898NM_014934.5AR
FANCM6147NM_020937.4AR
FSIP220747NM_173651.4AR
KLHL101827NM_152467.5AD
M1AP1717NM_001281295.2AR
MEIOB1044NM_001163560.3AR
NANOS1879NM_199461.4AD
NPAS22475NM_002518.4Ass
PLCZ11827NM_033123.4AR
PMFBP13170NM_031293.3AR
PPP2R3C1477NM_017917.4AR
QRICH25854NM_032134.2AR
SLC26A82913NM_001193476.2AD
SOHLH11164NM_001101677.2AD
SPAG176672NM_206996.4AR
SPATA161710NM_031955.6AR
SPEF25469NM_024867.4AR
SPINK2922NM_001271718.2AR
SUN51397NM_080675.4AR
SYCE11109NM_001143763.2AR
SYCP24679NM_014258.4AR
TAF4B2589NM_005640.3AR
TDRD94333NM_153046.3AR
TEX159537NM_001350162.2AR
TSGA102370NM_025244.4AR
TTC21A4037NM_001105513.3AR
TTC291582NM_031956.4AR
USP9Y7668NM_004654.4YL
XRCC2843NM_005431.2AR
ZMYND152229NM_001136046.3AR

Informations about the disease

Clinical Comment

Male infertility can be characterised by the absence of a measurable amount of sperm in the ejaculate (azoospermia) or a number of sperm in the ejaculate below 15 million / ml (oligozoospermia). The sperm morphology may be normal. In obstructive azoospermia, spermatozoa are produced, but they cannot mix with the rest of the fluid in the ejaculate because of an obstruction of the seminal ducts. In non-obstructive azoospermia, spermatogenesis itself is disturbed. Among the known genetic causes (responsible for a third of all cases) of azoospermia or oligospermia are deletions of the AZF region of the Y chromosome and - more rarely - mutations of individual genes.

(Basic diagnostic genes: ###; additional gene: ###).

Reference: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3583155/

 

Synonyms
  • Alias: Männliche Infertilität mit Azoospermie
  • Allelic: Hydatidiform mole, recurrent, 3 (MEI1)
  • Allelic: Ovarian dysgenesis 10 (ZSWIM7)
  • Allelic: Premature ovarian failure 12 (SYCE1)
  • Allelic: Premature ovarian failure 15 (FANCM)
  • Allelic: Premature ovarian failure 18 (C14orf39)
  • Allelic: Premature ovarian failure 20 (MSH4)
  • Allelic: Premature ovarian failure 7 (NR5A1)
  • Allelic: Premature ovarian failure 8 (STAG3)
  • 46XX sex reversal 4 (NR5A1)
  • 46XY sex reversal 3 (NR5A1)
  • Adrenal hyperplasia, congenital, due to 21-hydroxylase deficiency (CYP21A2)
  • Adrenocortical insufficiency (NR5A1)
  • Allelic: Ciliary dyskinesia, primary, 37 ((DNAH1)
  • Allelic: Hydrocephalus, normal pressure, 1 (CFAP43)
  • Androgen insensitivity (AR)
  • Androgen insensitivity, partial, with/-out breast cancer (AR)
  • Associated with nonobstructive azoospermia (NPAS2)
  • Azoospermia, obstructive, with nephrolithiasis (CLDN2)
  • Ciliary dyskinesia, primary, 3, with/-out situs inversus (DNAH5)
  • Ciliary dyskinesia, primary, 7, with/-out situs inversus (DNAH11)
  • Congenital adrenal hypoplasia (NR5A1)
  • Congenital bilateral absence of vas deferens; Cystic fibrosis (CFTR)
  • Endocrine disorders including disorders of sexual development (NR5A1)
  • Glucocorticoid deficiency 4, with/_out mineralocorticoid deficiency (NNT)
  • Hyperandrogenism, nonclassic type, due to 21-hydroxylase deficiency (CYP21A2)
  • Hypospadias 1, XL (AR)
  • Ideopathic primary adrenal failure (NR5A1)
  • Male infertility from defect in meiosis (TEX11)
  • Spermatogenic failure (DMRT1)
  • Spermatogenic failure (MEI1)
  • Spermatogenic failure 15 (SYCE1)
  • Spermatogenic failure 18 (DNAH1)
  • Spermatogenic failure 19 (CFAP43)
  • Spermatogenic failure 2 (MSH4)
  • Spermatogenic failure 20 (CFAP44)
  • Spermatogenic failure 21 (BRDT)
  • Spermatogenic failure 22 (MEIOB)
  • Spermatogenic failure 23 (TEX14)
  • Spermatogenic failure 24 (CFAP69)
  • Spermatogenic failure 25 (TEX15)
  • Spermatogenic failure 27 (AK7)
  • Spermatogenic failure 28 (FANCM)
  • Spermatogenic failure 33 (CFAP251)
  • Spermatogenic failure 38 (ARMC2)
  • Spermatogenic failure 40 (CHAP65)
  • Spermatogenic failure 41 (CFAP70)
  • Spermatogenic failure 44 (CEP112)
  • Spermatogenic failure 48 (M1AP)
  • Spermatogenic failure 49 (CFAP58)
  • Spermatogenic failure 5 (AURKC)
  • Spermatogenic failure 51 (CFAP91)
  • Spermatogenic failure 52 (C14orf39)
  • Spermatogenic failure 53 (ACTL9)
  • Spermatogenic failure 54 (CATIP)
  • Spermatogenic failure 57 (PNLDC1)
  • Spermatogenic failure 60 (TERB1)
  • Spermatogenic failure 61 (STAG3)
  • Spermatogenic failure 63 (RPL10L)
  • Spermatogenic failure 7 (CATSPER1)
  • Spermatogenic failure 71 (ZSWIM7)
  • Spermatogenic failure 75 (SHOC1)
  • Spermatogenic failure 8 (NR5A1)
  • Spermatogenic failure, XL 2 (TEX11)
  • Spermatogenic failure, XL 3 (CFAP47)
  • Spermatogenic failure, XL 4 (GCNA)
  • Spinal and bulbar muscular atrophy of Kennedy (AR)
Heredity, heredity patterns etc.
  • AD
  • AR
  • Ass
  • XL
  • XLR
  • YL
  • n.k.
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined