©istock.com/Andrea Obzerova
Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessAutism I, differential diagnosis

Summary

Short information

A consolidated panel containing 9 guideline-curated and altogether 36 curated genes for the orientating analysis of inherited autism spectrum diseases

ID
AP9999
Number of genes
36 Accredited laboratory test
Examined sequence length
24,6 kb (Core-/Core-canditate-Genes)
164,9 kb (Extended panel: incl. additional genes)
Analysis Duration
on request
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications
  1. array, 2. FRAX, 3. Gene: MECP2, PTEN recommended in ACMG guidelines NGS + [Sanger]

Gene panel

Selected genes

NameExon Length (bp)OMIM-GReferenz-Seq.Heredity
ADSL1455NM_000026.4AR
DHCR71428NM_001360.3AR
FMR11899NM_002024.6XL
MECP21461NM_004992.4XL
MED126534NM_005120.3n.k.
PAH1359NM_000277.3AR
TSC13495NM_000368.5Ass
TSC25424NM_000548.5Ass
UPF3B1452NM_080632.3XLR
ADNP3309NM_015339.5AD
ANK211874NM_001148.6AD
ARID1B6750NM_001374820.1n.k.
ASH1L8895NM_018489.3AD
ASXL36747NM_030632.3AD
CHD25487NM_001271.4n.k.
CHD87746NM_001170629.2AD
CUL32307NM_003590.5n.k.
DSCAM5985NM_001389.5n.k.
DYRK1A2292NM_001396.5AD
GRIN2B4455NM_000834.5AD
KATNAL21401NM_031303.3AD
KMT2A11919NM_001197104.2Ass
KMT5B1182NM_017635.5AD
MYT1L3555NM_015025.4AD
NAA152601NM_057175.5AD
NF18457NM_001042492.3AD
NF21788NM_000268.4AD
POGZ4233NM_015100.4AD
PTEN1212NM_000314.8AD
RELN10383NM_005045.4n.k.
SCN2A6018NM_021007.3n.k.
SETD54329NM_001080517.3AD
SHANK35386NM_001372044.2AD
SYNGAP14032NM_006772.3n.k.
TBR12049NM_006593.4AD
TRIP125979NM_004238.3AD

Informations about the disease

Clinical Comment

Autism spectrum disorders (ASD) are developmental disorders with particular social, communication and behavioural problems. Genetic alterations are risk factors for the development of ASD in addition to other mostly unknown causes. ASDs appear in early childhood, four times more frequently in boys than girls. Inheritance is generally multifactorial, i.e. several genes interact in a complex way with each other and with environmental influences. Inconspicuous genetic findings tend to be the rule.

Reference: https://www.awmf.org/leitlinien/detail/ll/028-018.html

 

Synonyms
  • Autism spectrum disorder, ASD
  • Allelic: Cardiac arrhythmia, ankyrin-B-related (ANK2)
  • Allelic: Episodic ataxia, type 9 (SCN2A)
  • Allelic: Long QT syndrome 4 (ANK2)
  • Allelic: Pseudohypoaldosteronism, type IIE (CUL3)
  • Allelic: Schizophrenia 15 (SJANK3)
  • Allelic: Seizures, benign familial infantile, 3 (SCN2A)
  • Allelic: VATER association, macrocephaly, ventriculomegaly; Susceptibility to tumor types (PTEN)
  • Adenylosuccinase deficiency (ADSL)
  • Angelman syndrome (UBE3A)
  • Autism susceptibility, XL 3 (MECP2)
  • Autism, susceptibility to, 18 (CHD8)
  • Bainbridge-Ropers syndrome (ASXL§)
  • Coffin-Siris syndrome 1 (ARID1B)
  • Cortical dysplasia-focal epilepsy syndrome; Pitt-Hopkins like syndrome 1 (CNTNAP2)
  • Developmental + epileptic encephalopathy 11 (SCN2A)
  • Developmental + epileptic encephalopathy 27 (GRIN2B)
  • Developmental + epileptic encephalopathy 94 (CHD2)
  • Down syndrome + congenital heart disease [OMIM] (DSCAM)
  • Encephalopathy, neonatal severe; Angelman syndrome (MECP2)
  • Epilepsy, familial temporal lobe, 7 (RELN)
  • Fragile X syndrome (FMR1_CCG)
  • Helsmoortel-Van der Aa syndrome; Mental retardation AD, 28 (ADNP)
  • Intellectual developmental disorder with autism + speech delay (TBR1)
  • Intellectual developmental disorder, AD 50, with behavioral abnormalities (NAA15)
  • Intellectual developmental disorder, AD 6, with/-out seizures (GRIN2B)
  • Intellectual developmental disorder, AD 64 (ZNF292)
  • Intellectual developmental disorder, XL 72 (RAB39B)
  • Intellectual developmental disorder, XL syndromic 14 (UPF3)
  • Intellectual developmental disorder, XL syndromic, Lubs type (MECP2)
  • Intellectual developmental disorder, XL, syndromic 13 (MECP2)
  • Lissencephaly 2, Norman-Roberts type (RELN)
  • Lujan-Fryns syndrome (MED12)
  • Macrocephaly/autism syndrome (PTEN)
  • Mental retardation with language impairment + autistic features, MRLIAF (FOXP1)
  • Mental retardation, AD 23 (SETD5)
  • Mental retardation, AD 26; Syndromic intellectual disability (AUTS2)
  • Mental retardation, AD 39 (MYT1L)
  • Mental retardation, AD 49 (TRIP12)
  • Mental retardation, AD 5 (SYNGAP1)
  • Mental retardation, AD 51 (KMT5B)
  • Mental retardation, AD 52 (ASH1L)
  • Mental retardation, AD 7 (DYRK1A)
  • Neurodevelopmental disorder with/-out autism or seizures (CUL3)
  • Ohdo syndrome, XL (MED12)
  • Opitz-Kaveggia syndrome (MED12)
  • Phelan-McDermid syndrome; Rett syndrome-like phenotype (SHANK3)
  • Phenylketonuria (PAH)
  • Pitt-Hopkins syndrome; Corneal dystrophy, Fuchs endothelial, 3 (TCF4)
  • Pitt-Hopkins-like syndrome 2; Schizophrenia, susceptibility to, 17; Autism (NRXN1)
  • Rett syndrome (MECP2)
  • Rett syndrome, atypical (MECP2)
  • Rett syndrome, preserved speech variant (MECP2)
  • Smith-Lemli-Opitz syndrome (DHCR7)
  • Tourette syndrome; Epileptic encephalopathy, childhood-onset (CHD2)
  • Tuberous sclerosis-1 + -2 (TSC1, TSC2)
  • Waisman syndrome (RAB39B)
  • White-Sutton syndrome (POGZ)
  • Wiedemann-Steiner syndrome (KMT2A)
Heredity, heredity patterns etc.
  • AD
  • AR
  • Ass
  • XL
  • XLR
  • n.k.
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code

Bioinformatics and clinical interpretation

No text defined