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Interdisciplinary CompetenceMolecular Diagnostics
Know how in the analysis of genetic material.
For the benefit of patients.

IllnessAutism II

Summary

Short information

A curated panel containing 25 core candidate genes and altogether 86 genes for the comprehensive analysis of inherited autism spectrum diseases

ID
AP9998
Number of genes
86 Accredited laboratory test
Examined sequence length
130,2 kb (Core-/Core-canditate-Genes)
378,9 kb (Extended panel: incl. additional genes)
Analysis Duration
auf Anfrage
Material
  • EDTA-anticoagulated blood (3-5 ml)
Diagnostic indications
  1. array, 2. FRAX, 3. genes: MECP2, PTEN recommende in ACMG guidelines NGS + [Sanger]

Gene panel

Selected genes

NameExon Length (bp)OMIM-GHeredity
ADNP3309AD
ANK211874AD
ARID1B6750Ass
ASH1L8895AD
ASXL36747AD
CHD25487AD
CHD87746AD
CUL32307AD
DSCAM5985AD
DYRK1A2292AD
GRIN2B4455AD
KATNAL21401AD
KMT2A11919Ass
KMT5B1182AD
MYT1L3555AD
NAA152601AD
POGZ4233AD
PTEN1212AD
RELN10383AD
SCN2A6018AD
SETD54329AD
SHANK35386AD
SYNGAP14032AD
TBR12049AD
TRIP125979AD
ANKRD117992AD
BAZ2B6792
  • No OMIM-Gs linked
n.k.
BCKDK1098AR
BCL11A2322AD
CACNA1D6546Ass
CACNA1H7062AD
CACNA2D33276n.k.
CIC4827AD
CNOT32262AD
CNTN43081Ass
CNTNAP23996AR
CTNND23678n.k.
CUX14518Ass
DDX3X1986Ass
DEAF11698Ass
DIP2C4671n.k.
ERBIN4517n.k.
FOXP12034AD
GABRB31422AD
GIGYF23900Sus
GRIA12721AD
GRIP13231AR
ILF21246n.k.
INTS62691n.k.
IRF2BPL2411AD
KAT2B2530n.k.
KDM5B4635AR
KDM6A4206XLD
KMT2C14736AD
LEO12137n.k.
MAGEL23750AD
MBOAT71200Ass
MECP21461XL
MED136525AD
MED13L6633AD
MET4227Ass
NCKAP13387AD
NLGN32487XL
NRXN14644AR
PHF36120n.k.
PTCHD12667XLR
RANBP173558AR
RIMS15079AR
SCN9A5934AD, AR
SHANK25404AD
SLC6A11800AD
SMARCC23459AD
SPAST1851Ass
SRCAP9693AD
SRSF111645n.k.
TAOK24892AD
TBL1XR11545XL
TCF205906AD
TNRC6B3090AD
TRIO9294AD
UBN24044AR
UPF3B1452XLR
USP152946n.k.
USP73309AD
WAC1944AD
WDFY310581AD

Informations about the disease

Clinical Comment

Autism spectrum disorders (ASD) are developmental disorders with particular social, communication and behavioural problems. Genetic alterations are risk factors for the development of ASD in addition to other mostly unknown causes. ASDs appear in early childhood, four times more frequently in boys than girls. Inheritance is generally multifactorial, i.e. several genes interact in a complex way with each other and with environmental influences. Inconspicuous genetic findings tend to be the rule.

Reference: https://www.awmf.org/leitlinien/detail/ll/028-018.html

 

Synonyms
  • Autism spectrum disorder, ASD
  • Allelic: Cardiac arrhythmia, ankyrin-B-related (ANK2)
  • Allelic: Cone-rod dystrophy 7 (RIMS1)
  • Allelic: Deafness, AR 97 (MET)
  • Allelic: Episodic ataxia, type 9 (SCN2A)
  • Allelic: Erythermalgia, primary (SCN9A)
  • Allelic: Hyperaldosteronism, familial, type IV (CACNA1H)
  • Allelic: Insensitivity to pain, congenital (SCN9A)
  • Allelic: Long QT syndrome 4 (ANK2)
  • Allelic: Neuropathy, hereditary sensory and autonomic, type IID (SCN9A)
  • Allelic: Paroxysmal extreme pain disorder (SCN9A)
  • Allelic: Pseudohypoaldosteronism, type IIE (CUL3)
  • Allelic: Schizophrenia 15 (SHANK3)
  • Allelic: Seizures, benign familial infantile, 3 (SCN2A)
  • Allelic: Sinoatrial node dysfunction + deafness (CACNA1D)
  • Allelic: Small fiber neuropathy (SCN9A)
  • Allelic: VATER association, macrocephaly, ventriculomegaly; Susceptibility to tumor types (PTEN)
  • Adenylosuccinase deficiency (ADSL)
  • Angelman syndrome (UBE3A)
  • Asperger syndrome susceptibility, XL 1 (NKGN3)
  • Autism susceptibility 17 (SKANK2)
  • Autism susceptibility 18 (CHD8)
  • Autism susceptibility, XL 1 (NLGN3)
  • Autism susceptibility, XL 3 (MECP2)
  • Autism susceptibility, XL 4 (PTCHD1)
  • Bainbridge-Ropers syndrome (ASXL3)
  • Branched-chain ketoacid dehydrogenase kinase deficiency (BCKDK)
  • Coffin-Siris syndrome 1 (ARID1B)
  • Coffin-Siris syndrome 8 (SMARCC2)
  • Corneal dystrophy, Fuchs endothelial, 3 (TCF4)
  • Cortical dysplasia-focal epilepsy syndrome; Pitt-Hopkins like syndrome 1 (CNTNAP2)
  • Desanto-Shinawi syndrome (WAC)
  • Developmental + epileptic encephalopathy 11 (SCN2A)
  • Developmental + epileptic encephalopathy 27 (GRIN2B)
  • Developmental + epileptic encephalopathy 43 (GABRB3)
  • Developmental + epileptic encephalopathy 94 (CHD2)
  • Developmental delay with variable intellectual impairment + behavioral abnormalities (TCF20)
  • Dias-Logan syndrome (BCL11A)
  • Down syndrome + congenital heart disease [OMIM] (DSCAM)
  • Encephalopathy, neonatal severe; Angelman syndrome (MECP2)
  • Epilepsy, childhood absence, susceptibility to, 5 (GABRB3)
  • Epilepsy, childhood absence, susceptibility to, 6 (CACNA1H)
  • Epilepsy, familial temporal lobe, 7 (RELN)
  • Epilepsy, idiopathic generalized, susceptibility to, 6 (CACNA1H)
  • Floating-Harbor syndrome (SOCAP)
  • Fragile X syndrome (FMR1_CCG)
  • Fraser syndrome 3 (GRIP1)
  • Global developmental delay with speech + behavioral abnormalities (TNRC6B)
  • Global developmental delay with/-out impaired intellectual development (CUX1)
  • Hao-Fountain syndrome (USP7)
  • Helsmoortel-Van der Aa syndrome; Mental retardation AD, 28 (ADNP)
  • Impaired intellectual development, distinctive facial features with/-out cardiac defects (MED13L)
  • Intellectual developmental disorder 61 (MED13)
  • Intellectual developmental disorder with autism + speech delay (TBR1)
  • Intellectual developmental disorder with speech delay, autism, dysmorphic facies (CNOT3)
  • Intellectual developmental disorder, AD 44, with microcephaly (TRIO)
  • Intellectual developmental disorder, AD 50, with behavioral abnormalities (NAA15)
  • Intellectual developmental disorder, AD 6, with/-out seizures (GRIN2B)
  • Intellectual developmental disorder, AD 63, with macrocephaly (TRIO)
  • Intellectual developmental disorder, XL syndrome, Snijders Blok type (DDX3X)
  • Intellectual developmental disorder, XL syndromic 13 (MECP2)
  • Intellectual developmental disorder, XL syndromic 14 (UPF3)
  • Intellectual developmental disorder, XL syndromic 14 (UPF3B)
  • Intellectual developmental disorder, XL syndromic, Lubs type (MECP2)
  • KBG syndrome (ANKRD11)
  • Kabuki syndrome 2 (KDM6A)
  • Kleefstra syndrome 2 (KMT2C)
  • Lissencephaly 2, Norman-Roberts type (RELN)
  • Lujan-Fryns syndrome (MED12)
  • Macrocephaly/autism syndrome (PTEN)
  • Mental retardation with language impairment + autistic features, MRLIAF (FOXP1)
  • Mental retardation, AD 23 (SETD5)
  • Mental retardation, AD 26 (AUTS2)
  • Mental retardation, AD 39 (MYT1L)
  • Mental retardation, AD 41 (TBL1XR1)
  • Mental retardation, AD 45 (CIC)
  • Mental retardation, AD 49 (TRIP12)
  • Mental retardation, AD 5 (SYNGAP1)
  • Mental retardation, AD 51 (KMT5B)
  • Mental retardation, AD 52 (ASH1L)
  • Mental retardation, AD 7 (DYRK1A)
  • Mental retardation, AR 57 (MBOAT7)
  • Mental retardation, AR 65 (KDM5B)
  • Microcephaly 18, primary, AD (WDFY3)
  • Myoclonic-atonic epilepsy (SLC6A1)
  • Neurodevelopmental disorder with hypotonia, impaired expressive language +/- seizures (DEAF1)
  • Neurodevelopmental disorder with regression, abnormal movements, loss of speech, seizures (IRF2BPL)
  • Neurodevelopmental disorder with/-out autism or seizures (CUL3)
  • Ohdo syndrome, XL (MED12)
  • Opitz-Kaveggia syndrome (MED12)
  • Parkinson disease 11 (GIGYF2)
  • Phelan-McDermid syndrome - Rett syndrome-like phenotype (SHANK3)
  • Phenylketonuria (PAH)
  • Pierpont syndrome (TBL1XR1)
  • Pitt-Hopkins syndrome (TCF4)
  • Pitt-Hopkins-like syndrome 2 (NRXN1)
  • Primary aldosteronism, seizures, + neurologic abnormalities (CACNA1D)
  • Rett syndrome (MECP2)
  • Rett syndrome, atypical (MECP2)
  • Rett syndrome, preserved speech variant (MECP2)
  • Schaaf-Yang syndrome (MAGEL2)
  • Schizophrenia 15 (SHANK3)
  • Schizophrenia, susceptibility to, 17 (NRXN1)
  • Smith-Lemli-Opitz syndrome (DHCR7)
  • Spastic paraplegia 4, AD (SPAST)
  • Syndromic intellectual disability (AUTS2)
  • Tourette syndrome; Epileptic encephalopathy, childhood-onset (CHD2)
  • Tuberous sclerosis-1 + -2 (TSC1, TSC2)
  • Vulto-van Silfout-de Vries syndrome (DEAF1)
  • White-Sutton syndrome (POGZ)
  • Wiedemann-Steiner syndrome (KMT2A)
Heredity, heredity patterns etc.
  • AD
  • AR
  • Ass
  • Sus
  • XL
  • XLD
  • XLR
  • n.k.
OMIM-Ps
  • Multiple OMIM-Ps
ICD10 Code
F84.0

Bioinformatics and clinical interpretation

No text defined